Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g01473 ATGGCGACGAGAAATCGAACTCCTCTGTACAGAAAGTACAGAGATGCTTTGAAGAGTGTTCGTGTTCCGACAATCTCGTCTTCGTCTCCGTCTTCTTCTTCTACTTCGGGTGGTCCGGTGATCGAATTGGTGAGCGCTTCGCTTCTGCATCCGAATCGGTCATATGTTCCACTTAGTACAGAAGATCCAGGGAGTTCAAGTAGGGGCACATTAACAGTGGGTCTACCTCCAGCTTGGGTAGATATTTCCGAAGAAATAGCCACAAATATGCAACTTGCACGGACAAAAATGGGGGAGTTAGTTAAGGCTCATGCCAAGGCTTTAATGCCCTCCTTTGGAGATGGCAAAGAAGATCAACACGTGATTGAGGCTCTTACCCAAGAGGTAACAGATCTGTTGAAGAGGTCTGAGAAGAGATTACAAAAACTTTCTGCAAGCGGGACTTCTGAGGATTCAAATGTTAGAAAAAATGTACAGTGTTCTCTTGCTACTGACCTTCAGAACCTTTCGATGGAGCTTCGAAAGAAACAGTCAACTTATTTGAAGCGTCTGCGGCAGCAAAAAGAGGGTCAAGATGGGGTTGACTTGGAGATGAATTTGAATGAAAATAAATCTAAAATGGAAGACCATGACTTCAGCGATATGGGTTTTAACGAGCACCAAATGTTCAAGTTAAAGAAAAGTGAAGCATTCACTGCAGAAAGGGAGAGAGAGATCAATCAGGTTGTGGAATCGGTAAACGATCTTGCTCAAATCATGAAGGATCTCTCAGTCCTCGTGATAGATCAGGGGACCATTGTTGATCGGATAGACTACAACATTCAGAATGTTGCAGCCTCAGTTGAGCAGGGCTATAAAGAATTACAGAAGGCAGAGAGAACACAGAGGAAAGGGGGAATGGTAATGTGTGCTACAGTGCTCGTTATCATGTGCTTCATTATGCTGGTCCTCCTGATCCTCAAGGCGCTAATATTGTGA 978 0.4417 MATRNRTPLYRKYRDALKSVRVPTISSSSPSSSSTSGGPVIELVSASLLHPNRSYVPLSTEDPGSSSRGTLTVGLPPAWVDISEEIATNMQLARTKMGELVKAHAKALMPSFGDGKEDQHVIEALTQEVTDLLKRSEKRLQKLSASGTSEDSNVRKNVQCSLATDLQNLSMELRKKQSTYLKRLRQQKEGQDGVDLEMNLNENKSKMEDHDFSDMGFNEHQMFKLKKSEAFTAEREREINQVVESVNDLAQIMKDLSVLVIDQGTIVDRIDYNIQNVAASVEQGYKELQKAERTQRKGGMVMCATVLVIMCFIMLVLLILKALIL* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g01473 325 SUPERFAMILY t-snare proteins 75 284 IPR010989 GO:0016020|GO:0016192
Eupl07g01473 325 ProSitePatterns Syntaxin / epimorphin family signature. 235 274 IPR006012 GO:0005484|GO:0006886|GO:0016020
Eupl07g01473 325 FunFam Syntaxin-43 76 283 - -
Eupl07g01473 325 PANTHER SYNTAXIN 81 310 IPR045242 -
Eupl07g01473 325 SMART SynN_4 70 185 IPR006011 GO:0016020
Eupl07g01473 325 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 229 291 IPR000727 -
Eupl07g01473 325 CDD SNARE_syntaxin16 233 290 - -
Eupl07g01473 325 SMART tSNARE_6 224 291 IPR000727 -
Eupl07g01473 325 Pfam SNARE domain 265 317 IPR000727 -
Eupl07g01473 325 Gene3D - 76 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g01473 Eupl-Chr7 36187879 36194526 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g01473 1 325 SNARE and Associated Proteins AT5G26980 75.385 2.33e-178 494
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g01473 K08489 - vvi:100259549 516.153