Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g01460 ATGGGCTCACGAAATATCAGAGATCTCTTGACGTCGTTTAGTTCTTCTCTGGACTTCTTCTCTGTTAGTTCAGGAGATGGTCGAATTAAGATTTGGGACACTTTGAGGGGACATGTCCAGACTGAGTTTGCAGACATCACTTCAACTGATGGCACAGACTTGTCCACAAAAGCAGAAAGCGGGCACCTTTCGCTTGATTACACATGCATGAAGTGGTTACCTTTAGAGAGAAAGAGGAAAAGAAAGGTTGGTTCTTCATTGTTGGTGTTAGGAACAGGTAGTGGTGATGTTTTAGCATTGGATGTGTCTGCTGGTCAGTTGAAGTGGAGAGTTAGTGACTGCCACCCTGGGGGTGTCAACGGCATTTCATTTTCTACCCACAGTTCATGCATATACACTGCAGGTGTTGATGGTATGGTTTGCCAAATTGATTACATCACAGGGAGCCTATTGGGGAAATTTAGAGCTTCTACAAAAGCAATATCCTCCATGGCCATCTCACCAGATGGGAAAATATTAGCAACTGCCGCTGCTCGGTTGAAGATTTTCAATTGTTCAGATAATAAAAAGATACAGAAGCTATCTGGCCATCCTGTGGCTGTTCGTTGTATGACCTTCACTGAAGATGGTAAATACGTGCTCTCTTCTGCTGTTGGTGAAAGATATATTGCTGTTTGGAAAATAGATGGTAGCAAAAAACAGTCTGCCAGCTGTGTGCTTTCTATGGAGCATCCAGCTGTATTTTTGGATTGTAAGTGCACAGACAATGAGGGCACAGATGTTGATGGTTTATACGTTCTAGCCATTTCAGAATTGGGTCTTTGTTATTTTTGGTATGGAAGAAATATTGAGGAATTGCGCAATACCAAGCCCACAAAAATCTCATTATCTACTGAGCCTCACCTATCAAAGAGTCACAAGGGTTCATTACCTATGATATTTGCTGCAAAATTACAAGGTGCCGTGAAACCTGGCTCTGGACAAGTGTTTGTTGCGTATGGTTCACTAATAAAGCCATCATTTGAGAAAATCTTAGTGCATCATGGTATAGACATAAAGTTAAATAGCACCCAGGATGGGGTTCTGCTGGCAATGAGTCACTCACGCAAGTCTCAGAAAGGCCAAGGCATACACACCGAAGTCACTGCTTTAGACCGCGCAAATGCAGAAGATGCCATACTCCCAATTCCAAAGCTTAATGATTTTAATGACAAAAAGAGAAGGCACCAACAATCAAGTATTGATCATGAGGAAGTAATGGCTGATGATCTGATCAACAGCAGGAGTAAAGCTAAGCCTGTGGATACTAAAGATGACCAGGAAAAATTTGAAGAGGATACTGTTACAGTATGCATGGAGGATCGGCTTAGATCATTAGGAATTCTTAGTAATGAAGATGATTTTAATAGAGATAGTTATCCATGGATACCCAACAACTTAACCCTGAGTTCTACCATGTTTAGTGATGCCCATTTTGAAACTAATATCACACAAAAGAAGATAAAGGCAGCTATTTTGTCTATGAAATCTCGGGATGCGCACAAGTTGCTGACAGTCTTGGTGGCCATATGGAATACAAGGCCAGGCAGTGGAGAATATGTTCTTCCCTGGATTTTTAGTATACTAGTGAATCACAGTTGCTACGTCAAAGCTCAGGAACTGTCTACCCAATTGCTTGATTCCTTATACAAGATGGCAGAACCTAAATGTGTAGCTGTTCAACCTTTATTACAGTTATCTGGTCGTTTGCAGCTTCTAATGGCACAGATTGACAAGGTTGGGCAGAACAAGACCCAAACATTATCAAATGATCACCAATTCTATGAAACTGAAGGCGAAGATGAAGATGAAGATGAAGATGTTGATGATTTTGTTTATGGGGAAGACGAAGATGAATCCCAAGGTGGTAGTGATGATGATAACTAG 1926 0.4128 MGSRNIRDLLTSFSSSLDFFSVSSGDGRIKIWDTLRGHVQTEFADITSTDGTDLSTKAESGHLSLDYTCMKWLPLERKRKRKVGSSLLVLGTGSGDVLALDVSAGQLKWRVSDCHPGGVNGISFSTHSSCIYTAGVDGMVCQIDYITGSLLGKFRASTKAISSMAISPDGKILATAAARLKIFNCSDNKKIQKLSGHPVAVRCMTFTEDGKYVLSSAVGERYIAVWKIDGSKKQSASCVLSMEHPAVFLDCKCTDNEGTDVDGLYVLAISELGLCYFWYGRNIEELRNTKPTKISLSTEPHLSKSHKGSLPMIFAAKLQGAVKPGSGQVFVAYGSLIKPSFEKILVHHGIDIKLNSTQDGVLLAMSHSRKSQKGQGIHTEVTALDRANAEDAILPIPKLNDFNDKKRRHQQSSIDHEEVMADDLINSRSKAKPVDTKDDQEKFEEDTVTVCMEDRLRSLGILSNEDDFNRDSYPWIPNNLTLSSTMFSDAHFETNITQKKIKAAILSMKSRDAHKLLTVLVAIWNTRPGSGEYVLPWIFSILVNHSCYVKAQELSTQLLDSLYKMAEPKCVAVQPLLQLSGRLQLLMAQIDKVGQNKTQTLSNDHQFYETEGEDEDEDEDVDDFVYGEDEDESQGGSDDDN* 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g01460 641 MobiDBLite consensus disorder prediction 601 641 - -
Eupl07g01460 641 Pfam Dip2/Utp12 Family 495 587 IPR007148 -
Eupl07g01460 641 PANTHER OS03G0300300 PROTEIN 4 640 - -
Eupl07g01460 641 ProSiteProfiles Trp-Asp (WD) repeats profile. 194 236 IPR001680 GO:0005515
Eupl07g01460 641 Pfam WD domain, G-beta repeat 10 33 IPR001680 GO:0005515
Eupl07g01460 641 Pfam WD domain, G-beta repeat 189 226 IPR001680 GO:0005515
Eupl07g01460 641 SMART WD40_4 104 144 IPR001680 GO:0005515
Eupl07g01460 641 SMART WD40_4 147 184 IPR001680 GO:0005515
Eupl07g01460 641 SMART WD40_4 2 33 IPR001680 GO:0005515
Eupl07g01460 641 SMART WD40_4 187 227 IPR001680 GO:0005515
Eupl07g01460 641 MobiDBLite consensus disorder prediction 609 641 - -
Eupl07g01460 641 Gene3D - 10 316 IPR015943 GO:0005515
Eupl07g01460 641 SUPERFAMILY WD40 repeat-like 12 292 IPR036322 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g01460 115 228 U-box Gene Family AT2G33340 25.424 1.86e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g01460 K14546 - ming:122092753 844.728