Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g01441 ATGTGCGGTGGTGCGATCATATACGACTTCATCCCTCGGAACCGCGGTCGCCGCGTCTCCAATTCAGACCGCTGGCCCAACTCCCCTTTTGCCAATTTCGACTCCGAGTTCTGCTGCTTCAGCCATGACGAACCCATCAACAAGAAGGCTTCTTCTTCAGGTGATGGGGCTGCTGAGAAGAACGGGAAGAGAAAGCGAAAGAACCTCTATAGAGGAATTCGACAAAGACCATGGGGAAAATGGGCTGCTGAGATTAGGGACCCTAGAAAAGGGGTAAGGGTTTGGTTGGGTACCTTTAACACCGCCGAAGAGGCAGCGAGGGCTTACGATAAGGAGGCAAGGAAGATAAGGGGCAAGAAAGCCAAGGTTAATTTCCCCAACGAAGAAGATGAGTATTCTGAGAATAATACCCAGATACCCACTTATCGAAATCCCCCTAATCCTTCTTATCAAGTCTATAATGGTGATATGTCGGAAAGTTTGAATTTTGGCTTTGCTGCTGATGTCAATCCCATTGTAGAGTTTCCATCTAATGGGTTTTACGGCGTTGATGCGGTGAATCCTGAACCTGCTCTTACTAATGGGGAAATTTTCGGATCTGGTTCAGAGGGTGGAAATTCTTCGATGGGTGGTGATGCTTTTATTGGACAAGTGAAAGTAAAAGAAGAAGAAGAAGAATCAAAACATGAAGAAGTAAACAAGGAAGAGGTGGTGGTGACCGAAGAGACGGAAGAGGAGAATGAGATTCTGAAGCTATCAGAGGAGCTAATGGCGTTCGAATCCTACATGAAATTCTATCAAATTCCTTATCTTGATGGTGGGGTTGAGCAGTCCATGGCGTCGAATCCTGTTCAGGAAAGCGTCGTTGGCAGTTCTTCCTTGGAGCTCTGGAGCTTTGATGATGTTCCTCCTCCCATGACTAACACGGTTCAGTAA 936 0.4669 MCGGAIIYDFIPRNRGRRVSNSDRWPNSPFANFDSEFCCFSHDEPINKKASSSGDGAAEKNGKRKRKNLYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDKEARKIRGKKAKVNFPNEEDEYSENNTQIPTYRNPPNPSYQVYNGDMSESLNFGFAADVNPIVEFPSNGFYGVDAVNPEPALTNGEIFGSGSEGGNSSMGGDAFIGQVKVKEEEEESKHEEVNKEEVVVTEETEEENEILKLSEELMAFESYMKFYQIPYLDGGVEQSMASNPVQESVVGSSSLELWSFDDVPPPMTNTVQ* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g01441 311 Gene3D AP2/ERF domain 69 127 IPR036955 GO:0003700|GO:0006355
Eupl07g01441 311 SUPERFAMILY DNA-binding domain 69 127 IPR016177 GO:0003677
Eupl07g01441 311 ProSiteProfiles AP2/ERF domain profile. 69 126 IPR001471 GO:0003700|GO:0006355
Eupl07g01441 311 PANTHER DNA-BINDING DOMAIN 52 248 IPR044808 GO:0003700|GO:0009873
Eupl07g01441 311 SMART rav1_2 69 132 IPR001471 GO:0003700|GO:0006355
Eupl07g01441 311 Pfam AP2 domain 70 118 IPR001471 GO:0003700|GO:0006355
Eupl07g01441 311 CDD AP2 70 127 IPR001471 GO:0003700|GO:0006355
Eupl07g01441 311 MobiDBLite consensus disorder prediction 47 69 - -
Eupl07g01441 311 FunFam Ethylene-responsive transcription factor 2 68 128 - -
Eupl07g01441 311 PRINTS Ethylene responsive element binding protein signature 92 108 IPR001471 GO:0003700|GO:0006355
Eupl07g01441 311 PRINTS Ethylene responsive element binding protein signature 70 81 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g01441 Eupl-Chr7 35690713 35692205 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g01441 1 298 AP2-EREBP Transcription Factor Family AT1G72360 34.091 5.08e-42 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Eupl07g01441 AP2 1.5e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g01441 K09286 - nnu:104606214 326.635