Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g01440 ATGTGTGGAGGAGCGATCATCGCGGACTGCATCGCCGCAAAACGTGCCCGGAATCTGACGACTCAAGACCTCTGGTCAGAATTCGACACCATCTTCGACCTCCTGGGCTTTGACTCCAACGACAACAACTACTCGACCCAGTTCGACAACAAGTTAAAGAGCGAGAAGACTAAAAAGAAGAACCCAGTTGTAGCAGAGGAGAGCAATAAACAAGGAGGGGCGACTCGTCGAAAGAGCGTTTACAGAGGTATCAGACAAAGGGCTTGGGGGAAATGGGCGGCTGAGATTCGCGACCCAAGAAAGGGCGTCAGAGTCTGGCTCGGCACTTACAAGACAGCTGAAGATGCCGCCAGAGCTTACGATGAGGCCGCCAAACGTATCCGAGGTCAAAAAGCCAAGCTCAACTTCCCTGAACCATCGCCACCACCCAAGCGACGTTGCCTAGTCTCCGAGTCGGGTCAAGCCAGTAATCAGCTCACCAGACCACCGCCGATGATGGGTTTTCCGTTTAAAGAGGAAAATTATAATCATGATCATACAAGGAGTAGTGATGTTGAACTGAAGGAGCAAATATCTAGCTTGGAATCGTTTCTGGAGTTGGAGCCTGACTCGGGCGAGTTAGACGCGAGTGAGGAATCGGAATCGGTGGATCTGTGGCTATTAGACGACGTTTCTCTTACGCCTCATCTCGTTTACTGA 699 0.5122 MCGGAIIADCIAAKRARNLTTQDLWSEFDTIFDLLGFDSNDNNYSTQFDNKLKSEKTKKKNPVVAEESNKQGGATRRKSVYRGIRQRAWGKWAAEIRDPRKGVRVWLGTYKTAEDAARAYDEAAKRIRGQKAKLNFPEPSPPPKRRCLVSESGQASNQLTRPPPMMGFPFKEENYNHDHTRSSDVELKEQISSLESFLELEPDSGELDASEESESVDLWLLDDVSLTPHLVY* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g01440 232 MobiDBLite consensus disorder prediction 132 167 - -
Eupl07g01440 232 ProSiteProfiles AP2/ERF domain profile. 80 137 IPR001471 GO:0003700|GO:0006355
Eupl07g01440 232 Pfam AP2 domain 79 129 IPR001471 GO:0003700|GO:0006355
Eupl07g01440 232 SUPERFAMILY DNA-binding domain 79 137 IPR016177 GO:0003677
Eupl07g01440 232 Gene3D AP2/ERF domain 80 138 IPR036955 GO:0003700|GO:0006355
Eupl07g01440 232 MobiDBLite consensus disorder prediction 54 78 - -
Eupl07g01440 232 PRINTS Ethylene responsive element binding protein signature 81 92 IPR001471 GO:0003700|GO:0006355
Eupl07g01440 232 PRINTS Ethylene responsive element binding protein signature 103 119 IPR001471 GO:0003700|GO:0006355
Eupl07g01440 232 CDD AP2 79 138 IPR001471 GO:0003700|GO:0006355
Eupl07g01440 232 PANTHER DNA-BINDING DOMAIN 56 192 IPR044808 GO:0003700|GO:0009873
Eupl07g01440 232 SMART rav1_2 80 143 IPR001471 GO:0003700|GO:0006355
Eupl07g01440 232 FunFam Ethylene-responsive transcription factor 2 79 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g01440 Eupl-Chr7 35683128 35684144 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g01440 1 224 AP2-EREBP Transcription Factor Family AT3G16770 46.000 1.50e-61 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Eupl07g01440 AP2 2.4e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g01440 K09286 - nnu:104606213 242.276