Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g01432 ATGTATAATCTCAATAGAAGAACAAAAATCCTGTATTCTCTCTTATCCATCTCAGCTCTTCTCTTATTCCTACTCTCCACAGCAACACCCCTAAAAAAGAGCCCAAAAACCTCTAAAACCCCAACATTACACCTCCACAGACACCTCCAAATTGCTCACTCAACTTGTGAAGGTACCTTATACCCTGAACTCTGTGTCTCAACTCTCTCTTCCTTCCCAGATCTCACTTCCAAATCAATCCCACAAATAATCTCTGCCGCTGTTAATCACACCGTTAAATTCGTCGAGAGTTCCGCCTCTAACTGCACTGGCATCAGAAAGAAGCTCAGGAAGCTGGACCCACTTCAAAAGCGAGCTCTGGATGACTGTCTTGAGCTCTTCGATCTCACCATTGCTGAGCTTGAAACCGCTGTGTCCGACTTATCCAACAAAAGCTCACCTGCACAGCACTATCATGACCTACAGACCTTGTTAAGCGCTGCGATCACGAACCAGTACACTTGTCTTGATGGGTTTGCTTACAGTAATGGACATGTGAGAAAATTGATCGATAAAAGCTTATATAAGATATCCCGTTTGGTTAGTAATTCTCTTGCGATGCTTAAGAAGATCCCAAAGGTGAACACCTCGAAGGCTGAGGTGTTTCCGGAGTACGGTAATATGATGGATGGGTTTCCAAGATGGGTGTCGCCCAAAGATCGACGGTTGTTGCAAGCGTCAACAAACGAGACGAAGTTTGATTTGGTGGTGGCGAAGGACGGGAGTGGGAACTTCACGACGATTAGTGAGGCTGTAGATGCGGCGCCTAATTCGACGACGACAAGGTTTGTCATTTATATAAAGGCAGGGGCATATTTGGAAAATGTGGAGGTGGTGAGGAAGAAGACGATGCTGATGTTTATCGGAGATGGGATCGGAAAGACTGTGGTGAAGGCTAGCCGGAATGTTGTTGATGGATGGACTACTTTCCGATCAGCTACTGTCGCTGTGGTGGGTGATGGATTCCTTGCTCGAGATATGACATTCGAAAACTCAGCTGGACCAAGTAAACATCAAGCAGTCGCTCTAAGAAGCGGTTCAGATCTTTCAGCGTTTTATCGTTGTAGTTTCGTCGCTTACCAAGACACACTATACGTTCATTCTCTTCGACAATTTTACAAATCATGCGACGTATACGGCACAGTTGATTTCATCTTCGGAAATGCAGCTGCTGTACTACAGGATTGCAATCTATACGCGCGTCTTCCAAATCCCAACCAAAGAAACATCTTCACTGCTCAAGGAAGAGAAGATCCAAACCAAAACACTGGGATTTCGATCATAGGCGGCAAAGTTACTGCTGCAGCGGATCTAATCCCGGAAAAGTCGTCGTTTAGGACTTACTTGGGACGACCATGGAAACAATATTCTAGGACTGTTTTTATGCGTTCATATATCGATGATCTAGTTGATCCTGCAGGATGGTTAGAATGGGATGGTGACTTTGCTCTTAGTACACTTTACTATGGGGAGTACTTGAACAGAGGTCCTGGTTCAAACACAACCAATAGGGTTACATGGCCCGGTTACAGAGTTATCAACAACTCTACAGAAGCAAGTCAGTTTACTGTAGCGGCTTTTATTCAGGGAAATGAGTGGCTATCATCCACCAACATTCCATTTTTCCCAGACTTAAGTTAA 1680 0.447 MYNLNRRTKILYSLLSISALLLFLLSTATPLKKSPKTSKTPTLHLHRHLQIAHSTCEGTLYPELCVSTLSSFPDLTSKSIPQIISAAVNHTVKFVESSASNCTGIRKKLRKLDPLQKRALDDCLELFDLTIAELETAVSDLSNKSSPAQHYHDLQTLLSAAITNQYTCLDGFAYSNGHVRKLIDKSLYKISRLVSNSLAMLKKIPKVNTSKAEVFPEYGNMMDGFPRWVSPKDRRLLQASTNETKFDLVVAKDGSGNFTTISEAVDAAPNSTTTRFVIYIKAGAYLENVEVVRKKTMLMFIGDGIGKTVVKASRNVVDGWTTFRSATVAVVGDGFLARDMTFENSAGPSKHQAVALRSGSDLSAFYRCSFVAYQDTLYVHSLRQFYKSCDVYGTVDFIFGNAAAVLQDCNLYARLPNPNQRNIFTAQGREDPNQNTGISIIGGKVTAAADLIPEKSSFRTYLGRPWKQYSRTVFMRSYIDDLVDPAGWLEWDGDFALSTLYYGEYLNRGPGSNTTNRVTWPGYRVINNSTEASQFTVAAFIQGNEWLSSTNIPFFPDLS* 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g01432 559 Pfam Pectinesterase 247 544 IPR000070 GO:0030599|GO:0042545
Eupl07g01432 559 SUPERFAMILY Pectin lyase-like 245 556 IPR011050 -
Eupl07g01432 559 SMART PMEI_2 47 200 IPR006501 GO:0004857
Eupl07g01432 559 Gene3D Invertase/pectin methylesterase inhibitor family protein 50 205 IPR035513 -
Eupl07g01432 559 ProSitePatterns Pectinesterase signature 2. 391 400 IPR033131 -
Eupl07g01432 559 CDD PMEI-like_3 54 206 - -
Eupl07g01432 559 PANTHER PECTINESTERASE 25 548 - -
Eupl07g01432 559 Gene3D - 241 558 IPR012334 -
Eupl07g01432 559 FunFam Pectinesterase 241 558 - -
Eupl07g01432 559 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 53 205 IPR035513 -
Eupl07g01432 559 NCBIfam pectinesterase inhibitor domain 13 203 IPR006501 GO:0004857
Eupl07g01432 559 FunFam Pectinesterase 48 205 - -
Eupl07g01432 559 Pfam Plant invertase/pectin methylesterase inhibitor 53 200 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g01432 Eupl-Chr7 35569736 35574771 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g01432 76 558 Carbohydrate Esterase AT4G02320 56.627 0.0 570
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g01432 K01051 - nnu:104606204 877.856