Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g01431 ATGTCTTTACCTAATATCCTTCTTTTTCTTCTTCTCCTACCTTCACTTCAAGTTCAAGCTCTTTCTACTACTTCCTTTTCCCATGAAGATAATATGAAATTGCAAGCCATGATCAAACAGGTTTGCATTAACACCATCAACCCCGAATCCTGCCTCTCCAACTTCCAATCCGAATGTGAGCGAATTGGCGATCGAAGCCCAATTTCGATTCTCCATGCTGCGATCAAGGCGACAATGACCGAAGCACAACGAGCCATCACATTAGTTACAAAGTTCACTGCTTTGTCGATCGATCCCCGTGAACAGGTCGCAATTGGAGATTGCGAGGAGCTACTCGATTATTCGGTGGACGAGTTAGGATGGTCAATGGAGGAGATGGAGAAGATCCGAAATGGTACGATTATTCACCATGAAGGAAACCTTCGAGCATGGCTTAGTGCAGCTCTGAGTAACCAAGACACATGCCTTGAAGGCTTCGAGGGCACCCGTGGTCATATAGAGAGGTACATTCAGGGGAGCTTAAAACAAGTGACACAACTCATTAGCAATGTACTATCCATGTATGATAGCATGCATAGTTTGCCAGCCAAACCAACTATAAATGGTACAAGAAACAATGGAGATTCGAATTTTCCGCCATGGTTCACGGACGGAGATCGAGAGCTTGTAGTTGCTGGCCCCCAAGGTATGCATGTGGACGCTGTTGTGGCGTTGGATGGGAGCGGAAAGTATCAATCGATCATGGATGCAGTGAATGAAGCTCCTAATTACAGTGAGAGGAGGTATGTGATCTATGTGAAGAAGGGAGTTTATAGGGAGAATATAGAGATGAAGAAGAAAAAGACCAATATCATGCTTGTTGGAGAAGGGATGGGGATCACAGTGGTCTCTGCTAACCGGAATTTCTTGCAAGGGTGGACTACATTTCGAACTGCTACATTTGCGGTTTCGGGAAAGGGATTCATAGCAAGAGACATGACATTCCGTAACACGGCGGGACCGCAAAACCGTCAAGCTGTCGCGCTCCGAGTTGACTCAGATCACTCGGCCTTCTTCCATTGCAGCATTGAGGGCTACCAAGACACCCTATACGCCCACTCGCTCCGTCAATTCTATCGTGAATGTAGCATCTATGGCACCATAGACTTCATATTTGGTAACGGTGCAGCCGTCCTCCAGGGCTGCAAGATATTCACAAGGCAGCCATTACCGCTCCAGAAGGTCACCATCACAGCCCAGGGTCGGAAAGACCCGAATCAGAGTACCGGGTTCTCTATACAAAGTAGCTATGTGTATGCCTCGCAGCCAACTTACTTAGGTAGGCCATGGAAACAGTATTCTAGGACTGTGTACATGCAAACATACATGAGCAAGCAGGTTCAGCCGCGGGGGTGGCTCGAATGGTTCGGGGATTTTGCTTTGAACACATTGTATTATGGCGAATACATGAACTACGGACCCGGGGCAGGACTAGCCGGGCGAGTAAAATGGCCCGGTTATCATGTGATAGGGAATGCTGCCACTGCCAATTTCTTTACAGTGGGGCGGTTCATTGACGGCGGTACGTGGTTGCCGTCTACCGGAATCAAGTTTCAAGCTGGTTTGAGCAATTAA 1614 0.4758 MSLPNILLFLLLLPSLQVQALSTTSFSHEDNMKLQAMIKQVCINTINPESCLSNFQSECERIGDRSPISILHAAIKATMTEAQRAITLVTKFTALSIDPREQVAIGDCEELLDYSVDELGWSMEEMEKIRNGTIIHHEGNLRAWLSAALSNQDTCLEGFEGTRGHIERYIQGSLKQVTQLISNVLSMYDSMHSLPAKPTINGTRNNGDSNFPPWFTDGDRELVVAGPQGMHVDAVVALDGSGKYQSIMDAVNEAPNYSERRYVIYVKKGVYRENIEMKKKKTNIMLVGEGMGITVVSANRNFLQGWTTFRTATFAVSGKGFIARDMTFRNTAGPQNRQAVALRVDSDHSAFFHCSIEGYQDTLYAHSLRQFYRECSIYGTIDFIFGNGAAVLQGCKIFTRQPLPLQKVTITAQGRKDPNQSTGFSIQSSYVYASQPTYLGRPWKQYSRTVYMQTYMSKQVQPRGWLEWFGDFALNTLYYGEYMNYGPGAGLAGRVKWPGYHVIGNAATANFFTVGRFIDGGTWLPSTGIKFQAGLSN* 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g01431 537 ProSitePatterns Pectinesterase signature 2. 377 386 IPR033131 -
Eupl07g01431 537 Pfam Plant invertase/pectin methylesterase inhibitor 37 187 IPR006501 GO:0004857
Eupl07g01431 537 Gene3D - 228 535 IPR012334 -
Eupl07g01431 537 FunFam Pectinesterase 227 535 - -
Eupl07g01431 537 ProSitePatterns Pectinesterase signature 1. 258 277 IPR018040 -
Eupl07g01431 537 Gene3D Invertase/pectin methylesterase inhibitor family protein 34 192 IPR035513 -
Eupl07g01431 537 CDD PMEI-like_4 42 188 - -
Eupl07g01431 537 SMART PMEI_2 33 187 IPR006501 GO:0004857
Eupl07g01431 537 NCBIfam pectinesterase inhibitor domain 6 191 IPR006501 GO:0004857
Eupl07g01431 537 SUPERFAMILY Pectin lyase-like 231 533 IPR011050 -
Eupl07g01431 537 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 37 191 IPR035513 -
Eupl07g01431 537 Pfam Pectinesterase 233 520 IPR000070 GO:0030599|GO:0042545
Eupl07g01431 537 PANTHER PECTINESTERASE 16 525 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g01431 Eupl-Chr7 35559704 35562530 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g01431 8 537 Carbohydrate Esterase AT3G05620 60.846 0.0 661
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g01431 K01051 - psom:113355236 860.522