Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g01429 ATGGAAGACGGAAGAAAGCTCCCTCAGCCTCGGGACGAAAACCCGGAAAGCTACGCCCTAAGCGGGAAAATCATGTTGAGCGCAATTGTTATCCTGTTCACAGTCGTACTCCTTATCATTTGCCTCCACATCTACGCTCGTTGGTTCCTCATCCGCGCCCGTAGACGCAACCAACATCTCCGCCGCAGAACTCGCCGGAACCACCTTGTCTTCACCTCCGACATACCCTCTAACACCGTCACCGTCGCCTCTCTCGGCCTCGACGCGTCTGTCCTCAAATCCCTCCCTACCTTCGTCTACTCCACCACCACCCACGACGAGGTGCTAGAGTGCGCCGTCTGCTTATCCGAGTTCGAAGAGAATGAGAAGGGCCGTCACCTTCCCAAATGCAATCATTGCTTTCACATCGACTGTATCGACATGTGGTTCCACTCTCACTCCACTTGCCCACTTTGCAGAGCCTCAGTTAAACCCGAAGCTCCGGAACCAGTAACCGAAACTCCCATCGAAATCGTTGTTGACTCGGCCGGGTCAGAACCCGGTACGAGTTCGGGACTCTGCCTGTCGTGCAGGGAGGACGAAGATGAATTGGGTTGTGCTTCTTCTTCGAGTTCGACCTCTTCGTTGCCGGTAGGGTCTCGAAGGAAACCACTAGAGTTGGTGGGTGTGTCGATCGAGGTACCCAGAAGGAACGAGAGCCTCAGGATATTCGAGGAGGAGCTACAGGGATCGCCGGGAGGTCAGGGATTCAAATCACCAGGGAGTCGGATTCGGTCGTTGAAGAGGATTTTAAGCAGGAAAGCTTCTATGCCTTCTCTGAGTTGCAGCTCTGCTACAGAGATCGATCTCGAGAGAGGAGAAGAAGAAGAAGCTCAAGCTCAAGCACAAGGTGAGAGAACGAGAACAACGTGA 912 0.5384 MEDGRKLPQPRDENPESYALSGKIMLSAIVILFTVVLLIICLHIYARWFLIRARRRNQHLRRRTRRNHLVFTSDIPSNTVTVASLGLDASVLKSLPTFVYSTTTHDEVLECAVCLSEFEENEKGRHLPKCNHCFHIDCIDMWFHSHSTCPLCRASVKPEAPEPVTETPIEIVVDSAGSEPGTSSGLCLSCREDEDELGCASSSSSTSSLPVGSRRKPLELVGVSIEVPRRNESLRIFEEELQGSPGGQGFKSPGSRIRSLKRILSRKASMPSLSCSSATEIDLERGEEEEAQAQAQGERTRTT* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g01429 303 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 15 158 IPR044675 -
Eupl07g01429 303 CDD RING-H2_EL5-like 110 153 - -
Eupl07g01429 303 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 76 159 IPR013083 -
Eupl07g01429 303 MobiDBLite consensus disorder prediction 288 303 - -
Eupl07g01429 303 FunFam RING-H2 finger protein ATL3 78 158 - -
Eupl07g01429 303 Pfam Ring finger domain 110 153 IPR001841 -
Eupl07g01429 303 SUPERFAMILY RING/U-box 91 159 - -
Eupl07g01429 303 SMART ring_2 111 152 IPR001841 -
Eupl07g01429 303 MobiDBLite consensus disorder prediction 267 303 - -
Eupl07g01429 303 ProSiteProfiles Zinc finger RING-type profile. 111 153 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g01429 Eupl-Chr7 35546330 35547841 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g01429 9 289 Rapid Response to Elicitors AT3G16720 49.675 9.16e-70 217
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g01429 - - vvi:100253381 293.893