Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g01421 ATGGTTGCAGGTGATCAAGTCCAAGAGCTCCCAAAAATGCGAGAGGCTGTGGAGGAGTTAAAGAAAATACAGGATATTGGCTTCCCTATAGCAGTTATGGGCCTGGTGGGTTACCTCAAGGGCCTAATCTCAGTTGTCTGCATGGGGATGCTAGGTCAATTAGAGCTAGCTGGCGGTTCACTAGCCATTGGATTCACCAACATCACCGGCTACTCGGTTCTTTCAGGCCTTGCCATGGGGATGGACCCCGTCTGTAGCCAAGCATTCGGTTCGCACAATATTCCACTACTAGCTCTCACACTACAAAGAACCATTCTCATGCTACTATGCGCCTCTTTCCCTATTGGATTGTTGTGGGTTAACTATGAACCTGTCATGCTGAAGCTACATCAAAATCCCGATGTCACGCGAGTCGCAAGCCTCTACTGCCAATTTGCACTTCCAGATCTCTTTGCGAATAGTCTTCTTCAACCTCTACGAATCTACCTCCGTAATATAGGAACACCGTGGCCATTAATGTGGTGCACTTTGCTTGGGGTCGTTCTACACCTTCCAATCACCATTTTCTTAACCTTCACTCTTCATCTTGGGATGCCTGGTATTGCAGTTGCCACCTTTGTTACCAACTTGAATACTCTCATCTTCCTTCTAGGTTACATGTTCTATTCACGTGCCCCTCAAGAGTCTTTGTGTATATCGCTATTACCACCATCTTTGACTACACTAGGAGAGGAATGGGGGATGTTGCTTCGACTTGCTTTACCGAGTTGTCTAGCCATTTGTCTAGAGTGGTGGTGGTACGAGTTCATGACACTACTAGCCAGTTATCTTCATAAACCTCACGTAACACTAGCAACGTCAGCAATTGTAATACAAACCACCTCGCTCATGTACATATTGCCTACAGCACTAAGTGCCTCCGTGTCGATCCGGGTCGGCAACGAGTTAGGGGGCCGTAGGCCTAGTAAGGCTCGTCTGGCAACCATAGTAGCCATGATACTAGCAGTCTTAGTCTCACTGGTGGGTTTCTTATGGACTACCTTTTGCAGAGAGGCATGGGGAAGAGTCTTCACCCAAGACTGTGAGGTCCTAGAGCTAACCAAGGTAGTGCTACCCATAATTGGTTTATGTGAGCTCGCAAATTGCCCACAAACAACGGGTTGTGGCGTGATCCGAGGAAGCGCTAGGCCCACCATATGTGCCACAATCAACCTCTACTCTTTTTACTTTGTGGGCACTCCAGTGGCCATAGTTTTAGCCTTCGTTTTCGAACTAGGCTTTGTGGGCCTTTGTTATGGGCTTCTAGCTGCTCAAATTGCTTGTGCCTTCTCCATCGTAACAGTGATTTGCAAGACGGATTGGGATAGAGAGTCGTTAAGGGCCAAAAATTTAGTTGAGAGTGGTGCTTGTGCACACGAAGACCAAATGGAAGAAGCTGAGTTTCTCAAAGAGGGTATCGATCTAGTTGCCGGTGGTAAATGCAAGAAGACCAAAAGAACTGCCCCCAAATCTGATGATATTTACCTCAAGCTCCTCGTCAAGCTATACCGATTCTTGGTAAGGAGGACCGGAAGCAAGTTCAATGCGGTGATACTGAGGCGGCTGTTCATGAGCAAGACCAACAAGCCCCCGATGTCTCTATCCCGATTGATTCGCTACATGACAGGAAAGGAGGATAAGATTGCTGTGCTTGTTGGGGCGGTTACCGACGATACTCGTGTTTACGAAGTCCCCGCACTGAAGGTGACTGCTTTGAGGTTTACAGAGACGGCGAGAGCGAGGATTGAGAAGGCGGGCGGCGAATGTTTGACCTTTGACCAACTTGCTCTCCGGGCTCCTCTAGGGCAAAGCACGGTTCTCCTCAGAGGTCCAAAGAATGCCCGTGAAGCAGTGAAGCACTTTGGTAAGGCTCCTGGTGTGCCACACAGCCACACTAAGCCCTATCTTTTCTCCACCGGTACCTATTACGGAGAACAACTTTTCTCTACCGAAGCTTCACTCTACCCTGTTGAAGCTATTCTCAAAAACCTCAACAATGAAACCCCTATTTTGGGAAATTTCTTTTCTAAGGGAGTTCAAGTGCACTTCTACATCTTCGTCCTTGCCACCTTTGCTACCTCCGTCCTTGTACCCTCCGCTTCCGGACTTCCTGAATCAGATAAATTACCTTCCTTGCCCAACTTTGCTTTTAGTTGGTTGGATGATAAGGATACATTTGAGGCAGGTGATATAGCAAACATAAAGATCAAAGTTCTAGGCAATTTTGAGAATGATGCAAATCTTCTTCCTGATAGCCATGCCCTTAATCTTACAATCACGGTGAACGGGAAGGAGGGAAATAGTTCATACATATCGGGCGTCTCTTCAACTCTTGAGGGGGATTCTACTAATTGGAAAATTTCCTTCACACCAATTTTGGTTGGCGTGTTTAATGTAATGATCATTGATGATCGTTTTCGAATTTCTGATTCTTCGCTTCATTTCCAAGTTTTAGCAGGGAGTATGTACCCATCAGTTTGCGTTGCTTCATGGAGGGGTCTTGTAAATGAGTTTGTGGCAGGGATACGAGCTACAGTTTTAATACTTCCTAAAGATGCATTTGGGAATAATATCTCATCAACGAGTGAAGAATCAAATTCGTATAAATTTATGGTTTCCGCATCTTATGAAAATGGTTCCATCATGAGTGTGCTCAATGTGACCTACATGGGTTGGAATGGATTTGGCTATGTCGGCATTGAGTTTATTGCTGCCACAGCTGGAAGCCTCTTATTAGTCATAGAGGGGGGAAATCAAACCTTGAACGGCTCTCCCCTACCTTTCAAGGTAAAACCAGGACCGCTGGATATCAGCAAGTCCTTGGCCAAATGGAATTATGAAACAAATGCCCTGCAAATATTTTCCAAGCTGGAAATCTTTATACACCAGCAAGACCAATTTGGGAACCTTGTTCCTGGTATGTATACATTTGACGCTCGAGTTGTTGAAAAGTGGACAAATCTATCTCTCCCTATAGCAGATTTGTACTTTAAAGAAGTGGTGCCAGGCATTCAGTTGTTTTCCTTTGGTGTATCTGAACCGGGGGACTTCGTGCTCACAATTTTTGATATGGAGCAAAATCAGCGCCTCTCAAATATGCCGTATGACTATACTGTCTTTGTAGGCTATTGTGATGGATTGAACAGTGTCGTCAATGGATCTGGTTTGGCTGAATCTATTGCAGGGAAAATGTCAAACTTTTCAGTTTATTTGGAAGATATATATCATAATCCCTCTCCAGTTGAGGCAGAAAGGCTTCAAGTACAAATTATAAGGAATTTTGATTCATATAATGTGTGGCCAAGCATATCTCCTATGCAGATTGTTGATGGGCATGGGCCCACCAGGGAACTTATTTATGGTATTAGCGGCTTTATAGGAAGTGCACCTGCACCATCTGTCGACCCGAAGAACATTTCTGGTGCAAATTTGAAAGTCCAGACTAGTGTTTTTAATGTCATTTATAGACCTGAAAAGTCTGGGATGTACGAGATTCGAGTATTTTGTGGAAATATTCCATTAAACGGTGGTCATTCATACGCAATGGAAGTAAGACCAGGTGAGGTTGATACAGAGCTCTCAAAAGTTGTGAAATTTGTTGCGAAAGTACCAAAGCTGGTTAGAAATGAAATAGAGGTGCAACTCGTGGATTCGTTTTCTAACCCTGTCCTGTTGCAACAAACAAAGCTGAGCCTCGAGTTTCGTTCTGTGAATACTTCTGGTATTTTGATTTGGACGTTTGTGGATAACAAGATTGGATCATATATTGGTTTCTATCTAGCTAAGGACATTGGCGCTTACGAGATATGTGTTTCATTTGAGGGCAGGCCTTTGTCTCCTTGTCCTTTTGTGGCCTATGTATACAGTAGTGAATACTTTCCTAAAGCCTACAATGATACTATTTCTGTCTGGGAGGACGAATCAGTTTCTTTTGATGCCCTAGGAAATGATTACTTTGCTGCTGGTAATGCAAGCATTGTTGAATCATCCATGCCACGTCATGGGTCACTTCTCCAGTATGGACGACTGTTTAGATACACACCTTATAAGGGATTTTTTGGGAATGATTCTTTTTCCTACACGATTTATGATATAAATAATAATATTGTTTCCGGCACTGCAATTATTTCTGTCCTCAGTATCCCACCCCAGTTTGTGACTTTACCTGTTCGATTGCAAGCAACTGAAGATGTGATAAGTCCCAGATTTGGTGGTTTCCCTGGCTTTGAGATAAAATATTCAGATCCCATGGAGAACATATCTGTCACTCTCAGTGCACACTCTGGGACTGTCTTCCTTTCTCCTATGCTGATGCAATTTTGGCAGCCAACATGGAGTGGACTTGTTGTGGACAGAGGGGAAAGAGAAGGGAAGGGCTTGGTCTTAGTAGGTTATGTAGAAGTGATCAATTCTGCCCTTCAGTCAATTCAATATCTTGGAAATGAAAACTTTTGTGGCGATGATGTTATCAAAGTCTCTGCCATGAATAAGAATGGAATTCATGATGCTCATGTTTCAGTGTTTGTGGAACCTATCAATGATCCTCCATTTATTCATGTCCCGGAATTTATAATCTTGGAGAAGAAGGGAAATGAAGATGGTTCACGGATCTTTGACAGACAAAGAGACAGGTTTGAGTTTTCAATGGGGGATCCAGATCTTCTTAACTTTCCTGGTAATGAGTCTCACTTTATGATCACACTTTCCTTGGAAGTTAATTCTGGACTTCTAATAACCAATCTACCAGCTGATCTTATTAATACAACTGAACTGAAGCTAAAGAACAGTTATCAGTGGCAGCCCCTTCAGACTTTTGTCACTATTTCAAAGCATTTTTTCGTCAAAGGAAAAGGAGTTAGGTTCCGTGGAACAATTAAGGTCTGCAACGATGCCATGCAAGAACTGATATATCAAGGCGGAGAACATGGTGCTGTTCTTACGGTGACTGTAAATGATATGGGAAATTACGGATGTTATCCAGATTGTGCCGAAAAGTTGTCATTGCCACTTTTTACTCAGGCTACTGTAAATCTAATCAGGAGGCGGCCAATGAGTTCACTGGTGGCTCATACCTTAGGTTCAGTGATCGTGATTGAGTTCATTACAATGTTTTTCCTGGGAGCGCTGCTACTATTTTTCATATGTAAATGTGCAAGTGTTCTTGGCAATGAAAGAAAAAGTTATTATGCCAGGGATAGCAAGCTCTCCAGCGTAGAAAAATTTCAGGAACCAATTTCAAGTACAACTTCGTCCGAGAATGCAACTTACTTCACTGCCTGTTGCTCAAGCCCCTTCTTGCTGAGGAGCCAGCCTCCCAACTTCCGTCAACGGTCGCGCCGTCAATCTGGAAATGGAGAATCAAACAAGGAAGAATATCATTCCTCTCAATCTTCTAGCGATCACCGTCGGACCCCTCTTCCCAATTTCACGCCTCTTGCTATTGAAAAAGGGGATAAGAAAAACTGTTTGCAAACCCCAAACAAATGA 5526 0.437 MVAGDQVQELPKMREAVEELKKIQDIGFPIAVMGLVGYLKGLISVVCMGMLGQLELAGGSLAIGFTNITGYSVLSGLAMGMDPVCSQAFGSHNIPLLALTLQRTILMLLCASFPIGLLWVNYEPVMLKLHQNPDVTRVASLYCQFALPDLFANSLLQPLRIYLRNIGTPWPLMWCTLLGVVLHLPITIFLTFTLHLGMPGIAVATFVTNLNTLIFLLGYMFYSRAPQESLCISLLPPSLTTLGEEWGMLLRLALPSCLAICLEWWWYEFMTLLASYLHKPHVTLATSAIVIQTTSLMYILPTALSASVSIRVGNELGGRRPSKARLATIVAMILAVLVSLVGFLWTTFCREAWGRVFTQDCEVLELTKVVLPIIGLCELANCPQTTGCGVIRGSARPTICATINLYSFYFVGTPVAIVLAFVFELGFVGLCYGLLAAQIACAFSIVTVICKTDWDRESLRAKNLVESGACAHEDQMEEAEFLKEGIDLVAGGKCKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILRRLFMSKTNKPPMSLSRLIRYMTGKEDKIAVLVGAVTDDTRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQSTVLLRGPKNAREAVKHFGKAPGVPHSHTKPYLFSTGTYYGEQLFSTEASLYPVEAILKNLNNETPILGNFFSKGVQVHFYIFVLATFATSVLVPSASGLPESDKLPSLPNFAFSWLDDKDTFEAGDIANIKIKVLGNFENDANLLPDSHALNLTITVNGKEGNSSYISGVSSTLEGDSTNWKISFTPILVGVFNVMIIDDRFRISDSSLHFQVLAGSMYPSVCVASWRGLVNEFVAGIRATVLILPKDAFGNNISSTSEESNSYKFMVSASYENGSIMSVLNVTYMGWNGFGYVGIEFIAATAGSLLLVIEGGNQTLNGSPLPFKVKPGPLDISKSLAKWNYETNALQIFSKLEIFIHQQDQFGNLVPGMYTFDARVVEKWTNLSLPIADLYFKEVVPGIQLFSFGVSEPGDFVLTIFDMEQNQRLSNMPYDYTVFVGYCDGLNSVVNGSGLAESIAGKMSNFSVYLEDIYHNPSPVEAERLQVQIIRNFDSYNVWPSISPMQIVDGHGPTRELIYGISGFIGSAPAPSVDPKNISGANLKVQTSVFNVIYRPEKSGMYEIRVFCGNIPLNGGHSYAMEVRPGEVDTELSKVVKFVAKVPKLVRNEIEVQLVDSFSNPVLLQQTKLSLEFRSVNTSGILIWTFVDNKIGSYIGFYLAKDIGAYEICVSFEGRPLSPCPFVAYVYSSEYFPKAYNDTISVWEDESVSFDALGNDYFAAGNASIVESSMPRHGSLLQYGRLFRYTPYKGFFGNDSFSYTIYDINNNIVSGTAIISVLSIPPQFVTLPVRLQATEDVISPRFGGFPGFEIKYSDPMENISVTLSAHSGTVFLSPMLMQFWQPTWSGLVVDRGEREGKGLVLVGYVEVINSALQSIQYLGNENFCGDDVIKVSAMNKNGIHDAHVSVFVEPINDPPFIHVPEFIILEKKGNEDGSRIFDRQRDRFEFSMGDPDLLNFPGNESHFMITLSLEVNSGLLITNLPADLINTTELKLKNSYQWQPLQTFVTISKHFFVKGKGVRFRGTIKVCNDAMQELIYQGGEHGAVLTVTVNDMGNYGCYPDCAEKLSLPLFTQATVNLIRRRPMSSLVAHTLGSVIVIEFITMFFLGALLLFFICKCASVLGNERKSYYARDSKLSSVEKFQEPISSTTSSENATYFTACCSSPFLLRSQPPNFRQRSRRQSGNGESNKEEYHSSQSSSDHRRTPLPNFTPLAIEKGDKKNCLQTPNK* 1842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g01421 1841 Gene3D Immunoglobulins 834 944 IPR013783 -
Eupl07g01421 1841 Gene3D Immunoglobulins 1204 1300 IPR013783 -
Eupl07g01421 1841 Gene3D - 484 659 - -
Eupl07g01421 1841 MobiDBLite consensus disorder prediction 1795 1811 - -
Eupl07g01421 1841 Gene3D - 1308 1395 - -
Eupl07g01421 1841 CDD MATE_eukaryotic 19 457 IPR045069 GO:0042910|GO:1990961
Eupl07g01421 1841 SUPERFAMILY Ribosomal proteins L15p and L18e 503 622 IPR036227 -
Eupl07g01421 1841 Pfam Bacterial Ig domain 1307 1377 - -
Eupl07g01421 1841 FunFam 60S ribosomal protein L18 484 664 - -
Eupl07g01421 1841 Pfam MatE 255 417 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Eupl07g01421 1841 Pfam MatE 29 187 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Eupl07g01421 1841 SUPERFAMILY E set domains 1222 1303 IPR014756 -
Eupl07g01421 1841 Pfam Ribosomal protein 60S L18 and 50S L18e 485 654 IPR021131 -
Eupl07g01421 1841 Gene3D Immunoglobulins 1058 1203 IPR013783 -
Eupl07g01421 1841 ProSiteProfiles Filamin/ABP280 repeat profile. 1262 1300 IPR017868 -
Eupl07g01421 1841 Pfam Filamin/ABP280 repeat 1223 1296 IPR017868 -
Eupl07g01421 1841 Pfam Filamin/ABP280 repeat 1056 1188 IPR017868 -
Eupl07g01421 1841 PANTHER MULTIDRUG RESISTANCE PROTEIN 14 454 - -
Eupl07g01421 1841 MobiDBLite consensus disorder prediction 1781 1841 - -
Eupl07g01421 1841 SUPERFAMILY E set domains 1057 1189 IPR014756 -
Eupl07g01421 1841 NCBIfam MATE family efflux transporter 37 430 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g01421 Eupl-Chr7 35387564 35423097 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g01421 486 653 Cytoplasmic Ribosomal Protein Gene Family AT2G47570 78.107 1.34e-85 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g01421 - - ming:122057543 1578.53