Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g01399 ATGGCCCACCTAAAGCCCAATTTCATTTTCTCCATTCCTGCGGCGCTTTATCTTCAGAACCGATCGCAGACGAGAGAGGCGAAGATGAGTCGAGGGAGTGCAGCCGGTCCCAAGGGGAAGAAGAAGGGATCAGCGTTCGTCATCGACTGTGGGAAGCCGGTGGAAGATAAGATTATGGACATAGCATCACTGGAGAAGTTTCTCCAGGAGAGGATCAAGGTAGGTGGTAAAGCCGGGGCTCTCGGAGACGCCGTTACCGTCTCCCGTGAAAAGAACAAGATCACCGTTACCTCCGATAGCCACTTCTCTAAACGTTATCTGAAGTACTTGACAAAGAAATACTTGAAGAAACACAACGTGCGGGACTGGCTTCGGGTGATCGCTTCCAACAAAGACCGGAATGTTTATGAGCTGCGGTACTTCAACATTGCTGAGAATGAAGGGGAGGAGGAAGATTGA 459 0.5033 MAHLKPNFIFSIPAALYLQNRSQTREAKMSRGSAAGPKGKKKGSAFVIDCGKPVEDKIMDIASLEKFLQERIKVGGKAGALGDAVTVSREKNKITVTSDSHFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAENEGEEED* 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g01399 152 Gene3D - 34 152 IPR038526 -
Eupl07g01399 152 PANTHER 60S RIBOSOMAL PROTEIN L22 20 152 IPR002671 GO:0003735|GO:0005840|GO:0006412
Eupl07g01399 152 Pfam Ribosomal L22e protein family 42 150 IPR002671 GO:0003735|GO:0005840|GO:0006412
Eupl07g01399 152 FunFam 60S ribosomal protein L22-2 33 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g01399 Eupl-Chr7 35092738 35095457 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g01399 29 152 Cytoplasmic Ribosomal Protein Gene Family AT3G05560 85.484 3.79e-66 195
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g01399 K02891 - zju:107426291 220.705