Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g01388 ATGGATGGTAACAAGGACGAAGCATCGAAATGTGTCGGGATTGCCAAAGTGGCTCTTGCATGCGGTGATAAGCAGCGTGCACTGAAATTCATTAGAATTGCACAACGCCTTAACCATAATGTCTTTGTTGATGATCTACTGGCTGCATGCGAGAAGTTAGAATCTATGGCTTCCACCTCTTCTGCCAAGGGAAAACCTGTAGATCGAAACCTAGAAGAGCCTGCTCCTTCTAAAGCTGCTGAGTGTACAAATGTAGACCGGACTTATACTGAAGAGCACGTTAAGTTGATCCGTGAAGTTAAGAGAAACATGGATTACTATGCACTTCTTGGTGTTGAAAAGACCTGCTCGGTTGAGGAGATAAGGAAGGCTTACAGGAAACTGTCTCTTAAGGTCCACCCTGACAAGAACAAGGCCCCAGGTTCGGAAGAAGCATTTAAGAAAGTCTGCAAGGCTTTTAAGTGCTTGAGCGACGAAGAATCAAGGAAGCAGTACGATCAGACGGGTCTGGTCGAAGAATTTGAGTACAACCAGCAGCACAATATTAGGAGGAGGAGGAGGAGAACTGCAAATGATTTCTTTGATGATGATTTCGATCCCGAAGAGATATTCAGGTCGTTCTTTGGTCAGACGGACATGTTTCGGACTACTCGTGTGTATAGGACGAGAGGAATGGCCAGTCAACCAAGGGAAAATAATCATGGAGGGGTTAATCCTATGGTTCTTCTTCAGATCTTGCCCGTCTTGATTATCTTCTTGCTTGCATACCTGCCTTTCTCTGAGCCTGATTATTCTCTGCAGAAGAATTACTCCTATCAGTTTCCGAAGGTCACTGAGAAGTATGGAGTAGAATTTTATGTCAAATCGTCTGATTTTGATCAGCATTTTCCTCATGGAAGTCCTTCTAGAGCAAACCTTGAGGATCATGTGGTGAGGGAATACAAAAATATGCATGGACGCTATTGTCATGTAGAGCTCCAAAGGCGACAGTGGAACAGAAAATATCCTACTCCTCACTGTGATAAGCTAAAGAATCTAGCAGTAGCATGA 1050 0.439 MDGNKDEASKCVGIAKVALACGDKQRALKFIRIAQRLNHNVFVDDLLAACEKLESMASTSSAKGKPVDRNLEEPAPSKAAECTNVDRTYTEEHVKLIREVKRNMDYYALLGVEKTCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDEESRKQYDQTGLVEEFEYNQQHNIRRRRRRTANDFFDDDFDPEEIFRSFFGQTDMFRTTRVYRTRGMASQPRENNHGGVNPMVLLQILPVLIIFLLAYLPFSEPDYSLQKNYSYQFPKVTEKYGVEFYVKSSDFDQHFPHGSPSRANLEDHVVREYKNMHGRYCHVELQRRQWNRKYPTPHCDKLKNLAVA* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g01388 349 ProSiteProfiles dnaJ domain profile. 105 169 IPR001623 -
Eupl07g01388 349 CDD DnaJ 105 158 IPR001623 -
Eupl07g01388 349 SUPERFAMILY Chaperone J-domain 102 215 IPR036869 -
Eupl07g01388 349 Pfam Domain of unknown function (DUF1977) 260 330 IPR015399 -
Eupl07g01388 349 Pfam DnaJ domain 105 166 IPR001623 -
Eupl07g01388 349 PRINTS DnaJ domain signature 107 125 IPR001623 -
Eupl07g01388 349 PRINTS DnaJ domain signature 125 140 IPR001623 -
Eupl07g01388 349 PRINTS DnaJ domain signature 141 161 IPR001623 -
Eupl07g01388 349 Gene3D DnaJ domain 102 220 IPR036869 -
Eupl07g01388 349 PANTHER AT29763P-RELATED 1 345 - -
Eupl07g01388 349 SMART dnaj_3 104 161 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g01388 Eupl-Chr7 34950547 34961506 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g01388 106 166 C2H2 Transcription Factor Family AT1G74250 43.284 8.93e-08 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g01388 K09518 - nnu:104598952 556.599