Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g01361 ATGCAGAACGAAGAGGGGCAAAATATGGATCTTTACATCCCCAGGAAATGCTCTGCCACAAATAGGTTGATTACGTCGAAGGACCATGCATCTGTCCAGGTTAATATCGGGCATTTGGATGAGAGTGGCATTTATACTGGCCATTTCACCACTTTCGCTCTCTGTGGTTTCGTCCGAGCTCAGGGAGATGCCGATGGTGCTCTCGACCGGCTCTGGCTGAAGAAGAAGGTTGAAGTCCGACAACAGTAG 249 0.494 MQNEEGQNMDLYIPRKCSATNRLITSKDHASVQVNIGHLDESGIYTGHFTTFALCGFVRAQGDADGALDRLWLKKKVEVRQQ* 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g01361 82 ProSitePatterns Ribosomal protein S21e signature. 11 19 IPR018279 GO:0003735|GO:0005840|GO:0006412
Eupl07g01361 82 Gene3D - 1 81 IPR038579 -
Eupl07g01361 82 PIRSF RPS21e 1 82 IPR001931 GO:0003735|GO:0005840|GO:0006412
Eupl07g01361 82 PANTHER 40S RIBOSOMAL PROTEIN S21 1 79 IPR001931 GO:0003735|GO:0005840|GO:0006412
Eupl07g01361 82 Pfam Ribosomal protein S21e 1 77 IPR001931 GO:0003735|GO:0005840|GO:0006412
Eupl07g01361 82 FunFam 40S ribosomal protein S21 1 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g01361 Eupl-Chr7 34528789 34532841 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g01361 1 81 Cytoplasmic Ribosomal Protein Gene Family AT5G27700 82.716 1.20e-48 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g01361 K02971 - ming:122090699 163.31