Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g01331 ATGTCAAACATCACAGGTGATGGTGGTACTGGGAGTTTCTCTTCTGGCAACACTGGAGAAGAAGTCCAACAACAACACCACCAGCTCAAAAATCACTTCCATGGCTCGAATTCGGGTCCTTCGACTACAACGACCACGACGACGACTAATAGTAATGGTTCCACCTCCCAACAACAACAACAACAGGTTAAGAAGAAAAGAAACCTCCCAGGAAATCCAGACCCAAGTGCGGAAGTTATTGCGCTATCGCCAACGACCCTAATGGCGACGAACCGATTCGTATGCGAGATATGCAATAAAGGATTCCAAAGAGATCAAAACCTCCAATTGCACAGAAGAGGTCATAATCTCCCATGGAAGCTTAAGCAAAGGACAAGCACGGAGATCAGAAAGAGGGTCTACATATGCCCCGAGCCGACATGCGTTCACCATAATCCAGCTCGAGCACTAGGTGACTTGACAGGAATCAAGAAGCATTTTTGCCGGAAGCATGGCGAGAAGAAATGGAAATGCGACAAGTGTTCGAAGAAGTATGCGGTGCAATCGGATTGGAAGGCCCATTCAAAAACCTGTGGCACAAGGGAGTACAAATGTGACTGTGGAACCATCTTCTCCAGAAGAGATAGCTTCATCACCCACAGGGCTTTCTGTGATGCACTAGCAGAAGAAAACAACAAGGTAAACCAGGGATTAATAGCATCCATGGGTGGAAACTTACAAGATCAGGTATCTGAGCTCATGTCCACCATGCCCATAAACAACACGACCAACAACACATCTACTGGGATTTGTGAATTCAATCAGACGGACACCAAGAACCCGCTGAAATCCCTCCAGCATGATCTCATGCCCATGCCACTCAAGTCCCTAAACATGGCACGAGGCATGTTCTCTGGAAACTCTGGTATCCTCTTCAATGGCCCCAGAAGCATCCCTTCAGCATCTTCATGTCTTCAGCTCAGCGCCAACAGTTCGTCGAGCTTCGACGGCGTCCACGACAGTCGAAACAGTCGACAACTTGCTGGATCAGCCCACATGTCCGCGACGGCTTTATTGCAGAAAGCAGCCCAAATGGGTGCAACTGCTAGTAGCAACGTCAACTCTCCGATGATGCAAAAGAACTTTGTTTCAGGCATGGCAGGGACCGATCAGCTCTCCGGTATGAGATCATCATCATATGTAGGAATGTCATATGATCCAATGCAGTCACAAACAGACCAATCACAACTAGTTGGTATGAATGGAGGATTCACTAACCAGTTCTTGCAGAAGGGGTCACAAGAGATGTCGTCGCAATTTTTCGATACGACCGTTGGGACCGATAGCTCGGCCACGGCCATGAATGATATGGGAATGTTCTCTAATTTGTTCATGAGCGGTGATCATCAACAACATGGATTCTTGAAGAACATGGAGCATGAGAACAACAATAGTACTAGTATGTTACAAGGAAGAACTGCAATCCCAGCTAGTGGAAGGAATCCAACAGGACTATCAAGGTTCGGGCGTAACGGTAGTGGGGATATGACGACTGTCGATTTCTTGGGTGTCGGAGGATCGGCGAACTTTCATGAACAACAACATCAACAGACACAAGAAGGATTGGAGTTTGAAGCAATTAGCCAGCAGAGAATGCAAGGTTTGCATCCCTTTCAACAGCAGCTCTCACATGGACAAGCAGTAATGGAGAAACACATGTGGGATGTTTGA 1710 0.4713 MSNITGDGGTGSFSSGNTGEEVQQQHHQLKNHFHGSNSGPSTTTTTTTTNSNGSTSQQQQQQVKKKRNLPGNPDPSAEVIALSPTTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSTEIRKRVYICPEPTCVHHNPARALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHSKTCGTREYKCDCGTIFSRRDSFITHRAFCDALAEENNKVNQGLIASMGGNLQDQVSELMSTMPINNTTNNTSTGICEFNQTDTKNPLKSLQHDLMPMPLKSLNMARGMFSGNSGILFNGPRSIPSASSCLQLSANSSSSFDGVHDSRNSRQLAGSAHMSATALLQKAAQMGATASSNVNSPMMQKNFVSGMAGTDQLSGMRSSSYVGMSYDPMQSQTDQSQLVGMNGGFTNQFLQKGSQEMSSQFFDTTVGTDSSATAMNDMGMFSNLFMSGDHQQHGFLKNMEHENNNSTSMLQGRTAIPASGRNPTGLSRFGRNGSGDMTTVDFLGVGGSANFHEQQHQQTQEGLEFEAISQQRMQGLHPFQQQLSHGQAVMEKHMWDV* 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g01331 569 SUPERFAMILY beta-beta-alpha zinc fingers 92 189 IPR036236 -
Eupl07g01331 569 ProSiteProfiles Zinc finger C2H2 type domain profile. 93 115 IPR013087 -
Eupl07g01331 569 Gene3D Classic Zinc Finger 148 227 - -
Eupl07g01331 569 SMART c2h2final6 93 115 IPR013087 -
Eupl07g01331 569 SMART c2h2final6 134 164 IPR013087 -
Eupl07g01331 569 SMART c2h2final6 169 189 IPR013087 -
Eupl07g01331 569 Gene3D Classic Zinc Finger 70 137 - -
Eupl07g01331 569 FunFam protein indeterminate-domain 12-like 72 140 - -
Eupl07g01331 569 ProSitePatterns Zinc finger C2H2 type domain signature. 95 115 IPR013087 -
Eupl07g01331 569 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 41 531 IPR031140 -
Eupl07g01331 569 MobiDBLite consensus disorder prediction 1 78 - -
Eupl07g01331 569 MobiDBLite consensus disorder prediction 1 67 - -
Eupl07g01331 569 FunFam protein indeterminate-domain 5, chloroplastic-like 147 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g01331 Eupl-Chr7 34125663 34130045 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g01331 64 363 IDZ Gene Family AT3G50700 55.901 1.09e-115 349
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Eupl07g01331 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g01331 - - nnu:104599011 759.985