Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g01327 ATGGTCGACGACATACGTGGTAGCGCAGGCTTTAAGTGCAAGGTTGCAGGTTCTGGTGATGAAGGAAGCAACAAGGAGCAAGATCAATTGTTGCCGATCGCCAATGTGGGCCGGATCATGAAGCAAAACCTACCAACTAATGCAAAGATCTCCAAAGAAGCCAAAGAAACCATGCAAGAGTGTGTATCCGAGTTCATTAGCTTTGTTACTGGTGAAGCATCTGACAAGTGTCACAAGGAGAAGCGGAAGACGGTGAATGGTGATGATATTTGCTGGGCTCTGAGTACACTAGGCTTTGATGATTATGCTGAGCCATTAAAAAGGTACTTGCATAAATATAGGGAGTTAGAAGGAGAGAAAGCTAATCAAAATAAGGTTAGCAATGCCGACAACAAAGACGAACCGTCGATCTTTCGAAATGACCAACCAAAGATTCAACCTTTAGCTCCTACTCCTTTGAAGTTCAATGTGATTGAGAGGAGTAATAGCTCTAACTCAAGGCCATGTTAG 510 0.4353 MVDDIRGSAGFKCKVAGSGDEGSNKEQDQLLPIANVGRIMKQNLPTNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICWALSTLGFDDYAEPLKRYLHKYRELEGEKANQNKVSNADNKDEPSIFRNDQPKIQPLAPTPLKFNVIERSNSSNSRPC* 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g01327 169 PRINTS CCAAT-binding transcription factor subunit A signature 58 76 - -
Eupl07g01327 169 PRINTS CCAAT-binding transcription factor subunit A signature 96 114 - -
Eupl07g01327 169 PRINTS CCAAT-binding transcription factor subunit A signature 77 95 - -
Eupl07g01327 169 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 31 94 IPR003958 -
Eupl07g01327 169 MobiDBLite consensus disorder prediction 1 27 - -
Eupl07g01327 169 Gene3D Histone, subunit A 19 147 IPR009072 GO:0046982
Eupl07g01327 169 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 19 131 IPR027113 GO:0001228|GO:0006355|GO:0016602
Eupl07g01327 169 Coils Coil 106 126 - -
Eupl07g01327 169 FunFam Nuclear transcription factor Y subunit B-3 19 143 - -
Eupl07g01327 169 SUPERFAMILY Histone-fold 27 145 IPR009072 GO:0046982
Eupl07g01327 169 ProSitePatterns NF-YB/HAP3 subunit signature. 61 77 IPR003956 GO:0005634|GO:0006355|GO:0043565
Eupl07g01327 169 MobiDBLite consensus disorder prediction 121 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g01327 Eupl-Chr7 34066384 34066893 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g01327 25 124 CCAAT-HAP3 Transcription Factor Family AT2G47810 84.000 4.12e-60 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Eupl07g01327 CBFD_NFYB_HMF 2.7e-27 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g01327 K08065 - nnu:104606101 253.832