Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g01309 ATGTCCAAAACCTTGGATAAACCCTGCAAATCTGACCAAACAGCCTATCCTCAAATGGGTTTTAATCTTATCCAATCTAGCACTACATCTCCATCTGAATCAAGTGAGAAAAGAGGTCGTAGAAAGCAAGCAGAGCCTGGGAGGTTTCTTGGTGTTAGGAGACGACCTTGGGGTCGATATGCTGCTGAGATCAGAGACCCTACAACCAAAGAAAGACACTGGCTTGGGACCTTTGACACTGCTCAAGAGGCAGCCCTTGCTTATGACAGGGCTGCCCTCTCTATGAAGGGTACCCAAGCAAAAACCAACTTTATCTACTCTGAAAACACTACCTGCTTTAACTCCTTCCTTACACCTTTTGATGCTCAAACCTTCTTACCACCATTAGAACTCCTCAGTTGTCCTCAGACCAATCAGATCAACCCATGTCAGCCTGACCCATATCGAGTTCCTGTCCAATTCAATCAGGACACGTGTACTCAAACTTCCACTAATAACAACTTCATTTTCTCTACTGATTCTGGGTCTGGTTACTTAGGAAGCATAATTCCTGATAATTACTTGAAACCTTCTTCAAACCCGACCAATTTAAACTCTGAAAATAACCCGATTTTCTCTCCTTCTGAAGTTCAACCTCATTGCACCAACATTAATGGAGTTCCTGATAATTTTCCTTACTCGCTGACTTCTTGTGAACTTTCTGCTGCAATCAACAACCCTTTAATGGTGGAAGATGGTTGCATGGGAGCTTCGTATCCGTTCATCGACAATCCTGGTTACGAGTTCATGACTCATCAGCAGGCTACTACTTCATCAAGCACTTACTCTCCTTCTCCATCAATTCCTCCTCTAAGTCATGACGTTATAGATTTGGGTTACTCACTCTTTTGA 891 0.431 MSKTLDKPCKSDQTAYPQMGFNLIQSSTTSPSESSEKRGRRKQAEPGRFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAQEAALAYDRAALSMKGTQAKTNFIYSENTTCFNSFLTPFDAQTFLPPLELLSCPQTNQINPCQPDPYRVPVQFNQDTCTQTSTNNNFIFSTDSGSGYLGSIIPDNYLKPSSNPTNLNSENNPIFSPSEVQPHCTNINGVPDNFPYSLTSCELSAAINNPLMVEDGCMGASYPFIDNPGYEFMTHQQATTSSSTYSPSPSIPPLSHDVIDLGYSLF* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g01309 296 Pfam AP2 domain 51 97 IPR001471 GO:0003700|GO:0006355
Eupl07g01309 296 PRINTS Ethylene responsive element binding protein signature 49 60 IPR001471 GO:0003700|GO:0006355
Eupl07g01309 296 PRINTS Ethylene responsive element binding protein signature 71 87 IPR001471 GO:0003700|GO:0006355
Eupl07g01309 296 ProSiteProfiles AP2/ERF domain profile. 48 105 IPR001471 GO:0003700|GO:0006355
Eupl07g01309 296 MobiDBLite consensus disorder prediction 1 49 - -
Eupl07g01309 296 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 35 163 - -
Eupl07g01309 296 MobiDBLite consensus disorder prediction 7 33 - -
Eupl07g01309 296 SUPERFAMILY DNA-binding domain 49 106 IPR016177 GO:0003677
Eupl07g01309 296 SMART rav1_2 48 111 IPR001471 GO:0003700|GO:0006355
Eupl07g01309 296 MobiDBLite consensus disorder prediction 34 49 - -
Eupl07g01309 296 FunFam Ethylene-responsive transcription factor 2 48 106 - -
Eupl07g01309 296 Gene3D AP2/ERF domain 48 106 IPR036955 GO:0003700|GO:0006355
Eupl07g01309 296 CDD AP2 48 104 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g01309 Eupl-Chr7 33815599 33816536 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g01309 2 239 AP2-EREBP Transcription Factor Family AT5G18560 40.000 3.34e-51 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Eupl07g01309 AP2 1.5e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g01309 - - nnu:104586349 330.487