Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g01306 ATGGCGAGGTCATTTTCAGCCATAGCTGGAGGTGCTGCAGGAGGGATTGCACTGGTGGTGATAGTCATCGGGTTCATACTGTTTTGCATGTCACAGTGTAAGAAATTCTCAAACAAGAATTCCGAAACGGGTTCTTCAGACCCATCTGCACTAGTGGAGTGGAATAGGGGAGGTGCATCCACTTCGGCAGGAGGTCCCCCCCAATCTGGACCACTGGGAGCAAGGCAATTCACACTGGAAGAGCTGGAGCAAGCAACCAATCAATTCAGTGAAAGCAAACTTATTGGACATGGTAGTTTTGGTTTGGTGTATAAAGGTTTGCTTCGTGATGGTACTGTTGTAGTTAAAAGGCGTCCTGGAGCACCTCGACGGGAATTTGTTGAAGAGGTGTGTTACCTGTCGGAGATTCAGCACCGTAACCTTGTTACCCTTCTTGGTTACTGCCAGGAAGATGGTTCTCAAATGTTGGTTTTCGAATATCTACCCAATGGCAGTGTCTGCAGTCATCTATATGATACTGGACAAGATTCAGCAACACTACTAGAGTTCAACAAAAAAAGACTTTCTATAGCTCTAGGGGCAGCTAAAGGTTTATGCCATTTGCATTCTTTGATACCTCCTTTAGTACATAAGAACTTCAAAACAGCTAATGTCCTGGTCGATGAGAGCTTCATTGCTAAAGTTGCAGATGCAGGGGTTTTTAAACTACTCGAGAGAATTGAGGATGCCGGCCCTTCATCTCGAACGATTGGTAGCGATGTTTTCCGAGATCCAGAGGTTGCAGAATCAGGAACTCTCTCTGAATCGAGTGATGTGTACAGCTTCGGAGTATTTCTTTTAGAGCTTGTAAGTGGACAGGAGGCTTCGCGGATTAACTTCTTGGGATCTGGTGAAAGCTTGATACAATGGGTAAAGTTGCGTGTGGGTTCCAACAATCTAGTGGACCATCGGGTCGCTGGCAGCTTCACTTCAGAGGGAATGAGGGCTTTGGTCAGGCTGACATTGCAGTGCTTGAGTAAAACTGGAAAAGGGCGACCAAAGATGGACATGGTTGTGTCTGAGCTAGACCGAATTCTCGAAAAGGAGATGACATTGACAACAGGCACGGGTGAAGGTACTACTACAATTACTCCTGGGAGCTACTTATTTGCTTCAGGGTGA 1161 0.4617 MARSFSAIAGGAAGGIALVVIVIGFILFCMSQCKKFSNKNSETGSSDPSALVEWNRGGASTSAGGPPQSGPLGARQFTLEELEQATNQFSESKLIGHGSFGLVYKGLLRDGTVVVKRRPGAPRREFVEEVCYLSEIQHRNLVTLLGYCQEDGSQMLVFEYLPNGSVCSHLYDTGQDSATLLEFNKKRLSIALGAAKGLCHLHSLIPPLVHKNFKTANVLVDESFIAKVADAGVFKLLERIEDAGPSSRTIGSDVFRDPEVAESGTLSESSDVYSFGVFLLELVSGQEASRINFLGSGESLIQWVKLRVGSNNLVDHRVAGSFTSEGMRALVRLTLQCLSKTGKGRPKMDMVVSELDRILEKEMTLTTGTGEGTTTITPGSYLFASG* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g01306 386 FunFam Protein kinase superfamily protein 161 372 - -
Eupl07g01306 386 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 16 364 IPR047117 -
Eupl07g01306 386 ProSiteProfiles Protein kinase domain profile. 89 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl07g01306 386 ProSitePatterns Protein kinases ATP-binding region signature. 95 116 IPR017441 GO:0005524
Eupl07g01306 386 Gene3D Phosphorylase Kinase; domain 1 68 160 - -
Eupl07g01306 386 Pfam Protein tyrosine and serine/threonine kinase 92 355 IPR001245 GO:0004672|GO:0006468
Eupl07g01306 386 Gene3D Transferase(Phosphotransferase) domain 1 161 373 - -
Eupl07g01306 386 SUPERFAMILY Protein kinase-like (PK-like) 69 355 IPR011009 -
Eupl07g01306 386 MobiDBLite consensus disorder prediction 38 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g01306 Eupl-Chr7 33736755 33742470 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g01306 26 356 Trihelix Transcription Factor Family AT1G70460 36.103 1.02e-59 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXa Eupl07g01306 PK_Tyr_Ser-Thr 4e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g01306 - - nnu:104586282 521.161