Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g01304 ATGGCTCGTATTGGTCACGGGCCTCACGGCTTAACTGACCGTCGCCGGTCAGCAAGATTTCACTCATCGCAGATTTTACTCGGCTTAGCAAGTTCGTCACCCTCGAAGTGCTACAGGAGAACGCTAATGGCTAGAACGTCTTCTTCATCAGTTCCATCTCAATCTAGGGATCGTTCTTGTGCAAATCAGGAGAGCTCCGTTTCGATGAGAATTGCGTTGGCGGTTCGAGAGAAATCATGTCCGATCTGCCTCAGACGCATCCATGGTGATCGCAGAGCAGCAGTTCTTACAGTCTGTATGCACGCTTATTGCATCGATTGCATTCGAAAGTGGAGCCAATTGAAGCGGAACTGCCCTCTTTGCAACGCAGAATTCGATTCTTGGTTCTTTAAAATTAGGGTTTCGAATGGCAAATTCGAAGAAGAGCGATTACCAGATCTCAATGAGAAGAAGAAGAAGATTGATATTGAAGACTACAGAAGTGAAAGAGGTCTTTTGCCATATCAAAGTATTCTAAGCAGATCAAGGGATGAACTGCATAGTGTGATCCGGCGGTCCAGGCCATTGCCATGGCGTCGATCATTTGGAAGGTTAAGATTTGGGCCATATGATGAGAGGCAGAGACATCAAGCCGAGGTCGTCGCAGAAAGAGTTCTCCAGTGGCGTGCTAGCATATATCACCAACGCTTGCAAGCTCTTCCTCTTCCTTCCAGAAATTGCCGGGAGCAGAATATATTAGGAAATACTGGTGTGAAGGAAAAAATGCAACGGCGAATAGAACCATGGATTCAAAGGGAGTTGAAGGCTATCCTTGCGGACTCAGATCCATCAATTATTGTTCATCTAGCCACATCACTCTATATCTTAAGCCTTGAAGAGAAGCTTAAGGCCCCCACAATGCATCTTGCTGCTGAAGATAAATATGTTGAACCATTGAGACCTTTCCTGCACAACCAGACCAATATGTTTTGGCATGAACTCAGATGCTTTGCAGAGAGCTCATTTACAATGGAAATATATGATTCTGTGGTTGAATATAAAAGGCTAGATTAA 1053 0.4492 MARIGHGPHGLTDRRRSARFHSSQILLGLASSSPSKCYRRTLMARTSSSSVPSQSRDRSCANQESSVSMRIALAVREKSCPICLRRIHGDRRAAVLTVCMHAYCIDCIRKWSQLKRNCPLCNAEFDSWFFKIRVSNGKFEEERLPDLNEKKKKIDIEDYRSERGLLPYQSILSRSRDELHSVIRRSRPLPWRRSFGRLRFGPYDERQRHQAEVVAERVLQWRASIYHQRLQALPLPSRNCREQNILGNTGVKEKMQRRIEPWIQRELKAILADSDPSIIVHLATSLYILSLEEKLKAPTMHLAAEDKYVEPLRPFLHNQTNMFWHELRCFAESSFTMEIYDSVVEYKRLD* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g01304 350 ProSiteProfiles Zinc finger RING-type profile. 80 122 IPR001841 -
Eupl07g01304 350 ProSitePatterns Zinc finger RING-type signature. 99 108 IPR017907 -
Eupl07g01304 350 SMART ring_2 80 121 IPR001841 -
Eupl07g01304 350 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 73 140 IPR013083 -
Eupl07g01304 350 SUPERFAMILY RING/U-box 74 128 - -
Eupl07g01304 350 Pfam Ring finger domain 79 122 IPR001841 -
Eupl07g01304 350 PANTHER E3 UBIQUITIN-PROTEIN LIGASE TOPORS 48 348 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g01304 43 327 C3H Transcription Factor Family AT2G39100 44.792 5.43e-69 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g01304 - - msin:131230955 391.349