Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g01275 ATGGCTGGTTCTCCAAGATATCCACAACGTCGGAACGAAGAACACAGAGAAGAAACCGAAGAAGAAGGAGAAGAAGAAGAAGAAGAGAACATGAGATCCCAACAACAACGTCTCTGTGATTACTGCGGAGAATCAAAAGCTCTCCTGTACTGCCGAGCCGACTCAGCGAAGCTTTGTTTCAACTGCGACCGGGAAGTCCACTCGGCCAACCCGTTATTCACCAAGCACGCTCGGTCTCAGCTCTGCGACGCCTGTGATTCGAACCCAGCTTCAATTTGTTGTTCGACGGAAAATCTGGTTCTATGCCAGAATTGTGATTGGGATACACACGGTCGATCTTTGTCTTTGCTGCACGACAGAAGACCTCTTGAGGGGTTTTCTGGCTGTCCTTCGGCGATTGAGTTGTCTTCAATTGTTGGGTTTAAAGACATGGGGGACAAGTCTCTGTTGGACAGTGGTGGTGATGGTTGCTTGGTTGGGTCTGGGTTTTATGGGCCGAACGTGACCGTTGATGGGTTTTCGGATTTGTTGGTGTGGGAGACTCCGCATATTGTTAGACTTGATGATCTAATTGTTTCGACTGATTCGAGCCAGAATTTTCAAGCTATAGGGATTCCACCTCTGCCCAAGAACCGAAATGTAGCTTGTGGGAAATACAAGGAAGAGATACTTCGTCAGCTCCATGATATGGTGAAGTTGGAAACCAGCTTGAATAATGATCATGAAGATATCGAATCACTTCTTGGATTCCAACCTCTGGTAGCGGAACAAAATCTTCAGCCAGGAAATATGGGTATATGCTTTGAACATGATGCAGAGCCAGTCATTTTGCCTAGTTATGAGGCAAGTGCAATTCAATGTCAAGGTGACCGTGGTGAGGCCGCAGATCAGATTCCCTTTCCTTCTACAATTTTAGCAAGCTACATTGAGGAAGGTTCGTTGGTTCTTGACAAACCCAATGATGCTGGTGGGAGTGGAATTCATACCCACGGTGGTCATGGAAAGCAATCACAACATCCCATTATTAGAGAAACCTTGCCGATCCTGCCAAAAGTTGTTACACATGAGTTAGCCGTTCATGACAGAGACTCGGTCATCTCACGGTACAAGGAGAAGAAGAAAACAAGGAGATATGATAAGCACATCCGCTATGAATCCCGTAAAGCTCGGGCAGAGTGCAGGGCAAGGATAAAGGGTCGTTTTGCTAAGGTGGACGACCACTAA 1224 0.4665 MAGSPRYPQRRNEEHREETEEEGEEEEEENMRSQQQRLCDYCGESKALLYCRADSAKLCFNCDREVHSANPLFTKHARSQLCDACDSNPASICCSTENLVLCQNCDWDTHGRSLSLLHDRRPLEGFSGCPSAIELSSIVGFKDMGDKSLLDSGGDGCLVGSGFYGPNVTVDGFSDLLVWETPHIVRLDDLIVSTDSSQNFQAIGIPPLPKNRNVACGKYKEEILRQLHDMVKLETSLNNDHEDIESLLGFQPLVAEQNLQPGNMGICFEHDAEPVILPSYEASAIQCQGDRGEAADQIPFPSTILASYIEEGSLVLDKPNDAGGSGIHTHGGHGKQSQHPIIRETLPILPKVVTHELAVHDRDSVISRYKEKKKTRRYDKHIRYESRKARAECRARIKGRFAKVDDH* 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g01275 407 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 38 405 - -
Eupl07g01275 407 ProSiteProfiles Zinc finger B-box type profile. 34 81 IPR000315 GO:0008270
Eupl07g01275 407 SMART bboxneu5 82 123 IPR000315 GO:0008270
Eupl07g01275 407 SMART bboxneu5 34 81 IPR000315 GO:0008270
Eupl07g01275 407 ProSiteProfiles CCT domain profile. 362 404 IPR010402 GO:0005515
Eupl07g01275 407 Pfam B-box zinc finger 35 78 IPR000315 GO:0008270
Eupl07g01275 407 ProSiteProfiles Zinc finger B-box type profile. 77 123 IPR000315 GO:0008270
Eupl07g01275 407 Pfam CCT motif 362 404 IPR010402 GO:0005515
Eupl07g01275 407 Coils Coil 9 36 - -
Eupl07g01275 407 MobiDBLite consensus disorder prediction 1 30 - -
Eupl07g01275 407 CDD Bbox1_BBX-like 38 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g01275 Eupl-Chr7 33237766 33243379 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g01275 34 377 C2C2-CO-like Transcription Factor Family AT2G47890 39.655 8.05e-70 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Eupl07g01275 zf-B_box 3.9e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g01275 - - psom:113357453 454.521