Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g01218 ATGGAGATTCCACACGCACCACCGCCACCACAAGCAGCACCACCTGCAGAACCGCCACTCTCTGTTCCGAGGGTTACGGTTTCCGAAATGGAGATCTCTCAGATTCCAGATGAATCCTCTACCGTCTGGGAATGGGGCAGTCTCTTGGATTTCACCGTCGATGATCAGTTGAATATCTCCTGGGATCCCGACGATCAGACGGTTGATCCGGTGTACTTTCCAGCGTCGGAAGTGGTAGCGGAACCATCGAATGAAGGATCAGACGGTTCTGATAGGACCCGGAAGCGGGACCCGAGGTTGATTTGTGAGAATTTCTTGGCCGGGCGGATTCCCTGCTCGTGCCCGGAGCTTGATGAGAAAGATGAAGAGGAAGGAGGGGCGGGGAAGAAGCGACCGAGGACGGTGACGATGGCGACCTCCCGATGTCAGGTTCCTGGGTGCGAGGCTGATATTAGCGAGCTCAAGGGTTACCATCGGCGGCACCGGGTTTGTCTCCGTTGCGCCAATGCAAGTTCCGTTGTTCTCGAAGGACAGCCCAAGCGGTATTGCCAGCAGTGCGGCAAGTTCCATATCTTGCCAGATTTTGATGAAGGTAAACGCAGTTGTAGAAGAAAATTAGAGCATCACAATAGGAGGCGGCGAAGAAAATCTACAAATTTTAGAGGTGCGGTTGAAAAGGAAACTCAAGGGGACCAGCCGGCTGAAGATTTTGCTTGTCCTGGTGAAGCAGTGAAAGATAATTTATGTATGAGCAACCATATAATGGATGGAGAAGCGGTGTTGGAGTCTGAAGATGGACATGTATCCCCCCCTTGCTCGGTTCCCAGCTCCCAGAATATCCAGAGTGATAGTGTTATATCTTTTGTGTCTTCTGGTGCAACCCAGAATGAAGGAGAAAAAGCTAATTCCAAATACACTCTTTCTTCATCTTTTTGTGACAATAAGAGTGCTTATTCATCTGTGTGTCCGACAGGTCGCATATCGTTCAAGCTTTATGATTGGAATCCTGCAGAATTCCCTAGACGACTTCGGCACCAAATATTCCAATGGTTGGCCAGCATGCCAGTTGAGCTGGAGGGGTACATCCGTCCTGGCTGTACAATCTTGACTGTATTCATCGCTATGCCACGGTTTATGTGGGAGAAGTTATCTGAAGATGCTGCTTCCTATGTACGTGACTTTGTCAGTGCACCTGAAAATATGCTATTTGGAAGAGGTGCTATAATTGTTTATTTGAACGACATGATTTTTCAGGTTCTAAAAGGGGGAACTATGTTGATGAATGTTAAAACGGAGGTGCGGGCTCCTAGGCTTCATTATGTTCATCCTACTTGTTTTGAGGCTGGTAAACCTATGGAGTTTGTTGCTTGTGGCAGTAATCTACTCCAGCCTAAATTTCGGTTTCTAGTGTCTTTCGCTGGAAAGTATCTTGCCTATGATTATTGTCTTGCCATTTCCCATGGGGAGACTGGATCATCCCATGATATTAAAGAGGACACAGCTCACAATTGTGACCATCAGATATACAAGATTTATATCCGTCACACCGAGGCAAAGCTTTTTGGCCCTGCATTTATTGAGGTTGAGAATGAGTCGGGGTTATCCAACTTCATCCCTGTCCTCTTTGGGGATAGACAAATATGTTCTGAAATGCAGATGGTGCAACAGAGCCTGGATGAATCTCCCCGTTTCAAAGGACCTCAGTTTGCAGTTCTTGATGCTATTTCTGAGTCATGCAAGGATTTTGTATTGAGGCAAACAGCAATGTCTGAACTTCTTTTAGATATCGCGTGGTTGGTCAAGGTGCCTAAGTTGGAAGATATAAAAAACCTTCTGAGCTCTACCCAGATTCAGAGATTCAATTGTTTATTGAATTTCCTAATACAGAACGAGTCCACAATTGTCTTGGAGAAAATTTTAGAATCTCTGAAGATTGTGATGGCTGCAGAGAAGTTATACAGCCCTGTTAATAAAATTGATTGTGATGATATGAGGCTGTTTCAGAAATATATGGATCGTGCTAGAGAAATTGTCCATCAGAGACTAAAACGAGCTGGGGAATTAGGAGTGAATTCAGAAAAGTCAACGCTGAAAGAGGATTGCTTTTCTCAAAACTATAGTGAAAATGACATGCTCTATGTTGTGCCAAGTACCAGTGAGGATATGGAGAAGGCAAAGGAGGAAAAGACGGAAACAATGACGATTTCAGCTTCTCAAGAGAGCAGTGGAACTGTTCCACTTATCAATAAAGAGGTTGTTATGAATGTGCACTATCGGCCCCGGAAAACCTCTGGTTGCATTCTTTTAAGCACTTCACGTCCTCTCGTTGTCGTAGTGGTTGCTGCGGTTGTTTGTTTTGGTGTTTGCGCTGTGTTGCTCCATCCTCACAAGGTTGGAGAATTTGCAGTCTCCATCCGCCGGTGTTTGTACGGCAACTCCAATCCTTAG 2448 0.4567 MEIPHAPPPPQAAPPAEPPLSVPRVTVSEMEISQIPDESSTVWEWGSLLDFTVDDQLNISWDPDDQTVDPVYFPASEVVAEPSNEGSDGSDRTRKRDPRLICENFLAGRIPCSCPELDEKDEEEGGAGKKRPRTVTMATSRCQVPGCEADISELKGYHRRHRVCLRCANASSVVLEGQPKRYCQQCGKFHILPDFDEGKRSCRRKLEHHNRRRRRKSTNFRGAVEKETQGDQPAEDFACPGEAVKDNLCMSNHIMDGEAVLESEDGHVSPPCSVPSSQNIQSDSVISFVSSGATQNEGEKANSKYTLSSSFCDNKSAYSSVCPTGRISFKLYDWNPAEFPRRLRHQIFQWLASMPVELEGYIRPGCTILTVFIAMPRFMWEKLSEDAASYVRDFVSAPENMLFGRGAIIVYLNDMIFQVLKGGTMLMNVKTEVRAPRLHYVHPTCFEAGKPMEFVACGSNLLQPKFRFLVSFAGKYLAYDYCLAISHGETGSSHDIKEDTAHNCDHQIYKIYIRHTEAKLFGPAFIEVENESGLSNFIPVLFGDRQICSEMQMVQQSLDESPRFKGPQFAVLDAISESCKDFVLRQTAMSELLLDIAWLVKVPKLEDIKNLLSSTQIQRFNCLLNFLIQNESTIVLEKILESLKIVMAAEKLYSPVNKIDCDDMRLFQKYMDRAREIVHQRLKRAGELGVNSEKSTLKEDCFSQNYSENDMLYVVPSTSEDMEKAKEEKTETMTISASQESSGTVPLINKEVVMNVHYRPRKTSGCILLSTSRPLVVVVVAAVVCFGVCAVLLHPHKVGEFAVSIRRCLYGNSNP* 816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g01218 815 MobiDBLite consensus disorder prediction 206 237 - -
Eupl07g01218 815 MobiDBLite consensus disorder prediction 1 21 - -
Eupl07g01218 815 SUPERFAMILY SBT domain 141 220 IPR036893 GO:0003677|GO:0005634
Eupl07g01218 815 ProSiteProfiles Zinc finger SBP-type profile. 139 216 IPR004333 GO:0003677
Eupl07g01218 815 MobiDBLite consensus disorder prediction 1 23 - -
Eupl07g01218 815 Pfam SBP domain 142 216 IPR004333 GO:0003677
Eupl07g01218 815 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 84 637 IPR044817 GO:0003677
Eupl07g01218 815 Gene3D - 138 203 IPR036893 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g01218 Eupl-Chr7 32382194 32401528 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g01218 39 806 SBP-box Gene Family AT5G18830 48.995 0.0 711
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Eupl07g01218 SBP 2.4e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g01218 - - nnu:104613341 1004.59