Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g01201 ATGGAGGATTTTAGGCAACCTGCAGCTTCTCCTTCATGTGGAAACCATAACTGTTTCAGTCCCATTACCCCAGAAAGGCTGGAAGGGGAGATTTCTCCAGTTGGAGATAGAAATCCGGTTGCTCGGTTTTCTAGCTCTGTTTCTTCCCAAGATTTGAGATCTTTAGATATGGAGAAGGAGAGACTGAATGAGTCCTCTCCTAGAGGAGTTATTGAAGATTGCATAAGGAGCTTAGAATCCGAAACGGGTTCTTCCAAGGCCAGCACCTCAGACTCTGAAACTCCTCAACTGAATCTTAGAGCAGCTTCTCACTGGCGTGGATTCCTTCGCTTATTGAAAACTAAATCAATGAGGCGCTTGGCCACCTTCCCTCCTGTCAGTGTTCCGAAGTTCTCGAAAAGAAACAGCAGAATTGAGAGAGAGAAGCCAGACCCATCCTTGTATTCCCCTGAAGATAATGATTTCTGTTATTTCAAGTCTTCCTGGAAGAACTTCACGCTCTCTGAACTCCAAGCTGCAACTAAAAATTTCAGCTCTGAAAATATAATTGGAAAAGGCGGTTATGCTGAAGTTTACAAGGGGTGTTTGCAAGATGGGCAGCTTGTAGCAATTAAGCGGCTCACCCGAGGAACGTCCGAAGAGAGGGTCGCGAACTTTTTATCCGAGCTTGGGATTATAGTCCATGTCAACCATCCTAATACTGCTAAGTTGATCGGGTATGGGGTCGAAGGAGGAATGCACCTTGTTCTTCAATTGTCTCCCCATGGGAGCTTAGCATCTCTGCTTCATGGTTCAAAGGAGAAATTGGACTGGGTTACTAGGTATAAGGTTGCTCTAGGGGCAGCTGAGGGTCTTCTTTATCTTCATGAGAGTTGTCAAAGGAGAATCATACACAGAGATATCAAGGCTGCTAATATTTTGCTTACAGAGGATTTTGAGGCTCAGGTTTCTGATTTCGGGCTTGCAAAGTGGCTACCAGAACAGTGGACCCACCACACTGTCTCAAAGTTTGAAGGCACATTTGGCTACCTTGCTCCTGAGTACGTCATGCACGGCATAGTAGACGAAAAAACTGATGTGTTTGCTTTTGGGGTGCTACTGTTGGAACTCATCACCGGACGCCGAGCTTTGGATAGCACACAGCAAAGCCTCCTGATGTGGGTGATGCCTTTGCTGGATAAGAACAATATCAGAGAGCTCGCAGATCCTTCCCTTGCTGATACCTATGACCCACAACAGATGAATCGTGTGGCCTTAACAGCTTCCTTGTGCATACAACACTCTTCAATTCTACGGCCTCGAATGAGTCAGGTTGTACAGCTTCTAAGAGGTGATGAAACTAGCTTGGAGTGGGCGAAACAATGTCAAAGGCCATTCCTCCGGAGAACCTACTCAGAGGAGCTGTTTGACGTGGAAGAATATAACTCTACGAGGTATCTGAACGATCTTAATCGACATAAGCAGATTGCTTTGGAGTTCTGA 1482 0.4582 MEDFRQPAASPSCGNHNCFSPITPERLEGEISPVGDRNPVARFSSSVSSQDLRSLDMEKERLNESSPRGVIEDCIRSLESETGSSKASTSDSETPQLNLRAASHWRGFLRLLKTKSMRRLATFPPVSVPKFSKRNSRIEREKPDPSLYSPEDNDFCYFKSSWKNFTLSELQAATKNFSSENIIGKGGYAEVYKGCLQDGQLVAIKRLTRGTSEERVANFLSELGIIVHVNHPNTAKLIGYGVEGGMHLVLQLSPHGSLASLLHGSKEKLDWVTRYKVALGAAEGLLYLHESCQRRIIHRDIKAANILLTEDFEAQVSDFGLAKWLPEQWTHHTVSKFEGTFGYLAPEYVMHGIVDEKTDVFAFGVLLLELITGRRALDSTQQSLLMWVMPLLDKNNIRELADPSLADTYDPQQMNRVALTASLCIQHSSILRPRMSQVVQLLRGDETSLEWAKQCQRPFLRRTYSEELFDVEEYNSTRYLNDLNRHKQIALEF* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g01201 493 MobiDBLite consensus disorder prediction 1 68 - -
Eupl07g01201 493 Gene3D Transferase(Phosphotransferase) domain 1 254 459 - -
Eupl07g01201 493 SMART serkin_6 177 442 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl07g01201 493 MobiDBLite consensus disorder prediction 53 67 - -
Eupl07g01201 493 Gene3D Phosphorylase Kinase; domain 1 144 251 - -
Eupl07g01201 493 ProSiteProfiles Protein kinase domain profile. 177 460 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl07g01201 493 SUPERFAMILY Protein kinase-like (PK-like) 155 442 IPR011009 -
Eupl07g01201 493 PANTHER OS08G0249100 PROTEIN 49 487 IPR046958 -
Eupl07g01201 493 ProSitePatterns Protein kinases ATP-binding region signature. 183 205 IPR017441 GO:0005524
Eupl07g01201 493 Pfam Protein tyrosine and serine/threonine kinase 180 441 IPR001245 GO:0004672|GO:0006468
Eupl07g01201 493 ProSitePatterns Serine/Threonine protein kinases active-site signature. 296 308 IPR008271 GO:0004672|GO:0006468
Eupl07g01201 493 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK2 254 456 - -
Eupl07g01201 493 FunFam Receptor-like cytosolic serine/threonine-protein kinase RBK2 148 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g01201 Eupl-Chr7 32165667 32170523 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g01201 154 493 Trihelix Transcription Factor Family AT1G70460 40.341 1.05e-73 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Eupl07g01201 PK_Tyr_Ser-Thr 9.4e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g01201 - - ming:122071148 709.523