Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g01200 ATGCACCTCTTTTTGTTCTTCATTTTAGCCTTAGGGTTAGGGTTTCCTAATTTTACTTATTCTTTCGTTAATGGCCGCGAAATCCCAACCAGAAAACTCGCTGATTCTCCATGTCCGATGAACTTTGATGTTCTTCGTAAACTCGTCCAAGGCTCGAAGAAGCGCTCAGAGCTTCTCGATGTTCCGACAGAGTGTCGATACATTCTTCAAGGTCTTCATCTCGTTCAATCCGATTACCTCAAAACCACTGGTTTCTTTCTGCCCCCTTTGAATGCCTCTGAGTCTTGTTGGGTCTCGTACCAGACCTTAGTCGATGAATTCTTCCCTAAATTCAATATCCGATCGGCTTGTGGGTTCCAAACTAGCTGGATTTCTGAGGGATGTATGAACATTACGTCTCGATCGCAGTTCGAAAACTTAGTTCCTGAGGCTACGTTGCAAGACGTGCGGCGTTCTTGCAACCAGTCTCTTGAGAATAATTCTCCTTGTGCCGCGTGCACGACAAGCTTGTCGCGCCTCCAGGCGTCTTATCTTCCTGGTCCGGTAGTAGGGAATGTGACCGAATGTGACGCGTATCCGTTCATCTATGCGGCTGCTTTGGATAATAATTCTGCATCGACTGATGATGGAACTACAAAGTGTTTGTTTGCTCTTGATTTATCTTCGCCTGGTTCGGTAAATAAGAAACGGAAAGCTGTGATTTGTGGGGTTGTGATAGGTTGCATTTTAGGCTTGTTGGGGGTAGTTGGAGGGTTTTGGTTTCTGTGGAGGAGGAGCAAGAAAAGGAATGGGAGGAAGAAGGTGGTAAAATTGGAGAAGAGTTTGGGTTCACAGTTGGATTCAATTAATGCGAGCACGACTCTGGTTAGGTTCACGTTCGAGGAATTGAAACAGGCTACAAAGAATTTCTATAGGGATAACATAATTGGGAAAGGAGGCTACGGGAATGTTTACAGGGGGATTTTATTCGATGGATCTGAGGTTGCCTTGAAGAGATTCAAAAACTGTTCTGCTGCTGGGGATGCCAGTTTTGCCCACGAGGTTGAAGTTATTGCGAGTATTAGGCATGTAAACCTTGTTGCTCTAAGAGGGTACTGTACTGCGACTACTCCTTTCGAAGGCCACCAGAGGATAATTGTGTGTGATTTGATGCGTAATGGAAGTCTTTATGATCATCTTTTCGGGTCGGTGGAGAAGAAGCTGAGTTGGCCAGTTCGTCAGAAGATCGCCCTTGGGACAGCACGAGGTTTGTCTTACTTACATTATGGAGCTCAGCCTACTATCATCCACAGGGATATTAAAGCTAGTAATATACTCTTGGACGAAAATTTTGAGGCCAAGGTTGCTGATTTCGGGTTGGCAAAGTTTACACCAGAGGGAGTGACTCATCTGAGCACCAGGGTAGCTGGGACTTTAGGATACGTTTCCCCCGAGTATGCTTTGTATGGGCAGTTGACGGAGAGAAGTGATGTTTACAGCTTTGGGGTTGTGCTTCTTGAGCTTTTGAGTGGGAAGAAGGCGCTTGTTGCCTCCAATGAGAACCAAACTTTCCTAGTTACTGACTGGGCTTGGTCACTAGTGAAGAGAGGGAGAACATTGGATGTTATTGAAGATGGCATGCCCGAGTTGGGACCGCCAGAAGTCATGGAGAAGTATATACTGATTGCCGTTCTTTCTTCTCATCCGCAGTTATATGCTAGGCCGACAATGGATCAGATTGTGAAGATGTTGGAAACTGAGCTGCCCGTCCCCTCAATTCCAGAACGTCCCATTCCTATTGTCTCTGGAATCGATGATATTGAGAAATCAGTTAGCTGTAGTGACTCGGGTTATCTGTCTAGTTCTGCTGGTTACCATCCATTTACCTTTGAGAGTGATCCTCCAAGTTCTGACCAAACGGGGAAGGAGTAA 1911 0.4574 MHLFLFFILALGLGFPNFTYSFVNGREIPTRKLADSPCPMNFDVLRKLVQGSKKRSELLDVPTECRYILQGLHLVQSDYLKTTGFFLPPLNASESCWVSYQTLVDEFFPKFNIRSACGFQTSWISEGCMNITSRSQFENLVPEATLQDVRRSCNQSLENNSPCAACTTSLSRLQASYLPGPVVGNVTECDAYPFIYAAALDNNSASTDDGTTKCLFALDLSSPGSVNKKRKAVICGVVIGCILGLLGVVGGFWFLWRRSKKRNGRKKVVKLEKSLGSQLDSINASTTLVRFTFEELKQATKNFYRDNIIGKGGYGNVYRGILFDGSEVALKRFKNCSAAGDASFAHEVEVIASIRHVNLVALRGYCTATTPFEGHQRIIVCDLMRNGSLYDHLFGSVEKKLSWPVRQKIALGTARGLSYLHYGAQPTIIHRDIKASNILLDENFEAKVADFGLAKFTPEGVTHLSTRVAGTLGYVSPEYALYGQLTERSDVYSFGVVLLELLSGKKALVASNENQTFLVTDWAWSLVKRGRTLDVIEDGMPELGPPEVMEKYILIAVLSSHPQLYARPTMDQIVKMLETELPVPSIPERPIPIVSGIDDIEKSVSCSDSGYLSSSAGYHPFTFESDPPSSDQTGKE* 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g01200 636 ProSitePatterns Serine/Threonine protein kinases active-site signature. 428 440 IPR008271 GO:0004672|GO:0006468
Eupl07g01200 636 SUPERFAMILY Protein kinase-like (PK-like) 287 603 IPR011009 -
Eupl07g01200 636 Pfam Protein kinase domain 306 517 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl07g01200 636 CDD TM_EGFR-like 232 262 - -
Eupl07g01200 636 CDD STKc_IRAK 309 578 - -
Eupl07g01200 636 SMART serkin_6 303 577 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl07g01200 636 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 384 585 - -
Eupl07g01200 636 ProSiteProfiles Protein kinase domain profile. 303 581 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl07g01200 636 Pfam SPARK 34 178 IPR043891 -
Eupl07g01200 636 MobiDBLite consensus disorder prediction 617 636 - -
Eupl07g01200 636 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 135 596 - -
Eupl07g01200 636 Gene3D Phosphorylase Kinase; domain 1 264 382 - -
Eupl07g01200 636 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 264 382 - -
Eupl07g01200 636 ProSitePatterns Protein kinases ATP-binding region signature. 309 331 IPR017441 GO:0005524
Eupl07g01200 636 Gene3D Transferase(Phosphotransferase) domain 1 384 582 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g01200 Eupl-Chr7 32149982 32152467 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g01200 35 631 Receptor kinase-like Gene Family AT2G48010 61.500 0.0 756
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Eupl07g01200 Pkinase 7e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g01200 - - nnu:104613216 906.746