Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g01179 ATGGGTTGTGTCCATGGGAAGACTTGTAGCCGTTACCCATCTTCGTCTGATGAGGATAGCCGACACTTTCGAGAGGTTGGTCCAAATGGTAGTAACAACATCCATACCCATAGGATTAGGAACCATCGGCACATACTCGCAGATACGCCTTTGGAATTCGCCCATGTCCCTTCCCACGACTTCCAGTTAGAGTATTCAGTTCTTACGCAGCGAGGCTTCTACCCTGAGTCCCCTGATAAAGAAAACCAAGACAGTTTCTGCATTAGAACCCAAATTCAAGGTAACCCAAATCTCCATTTCTTTGGCGTCTTCGATGGGCACGGCCATTTTGGCACTCAATGTTCAAATTTTGTCAGGGATAGGCTGGTAGAGATCCTCTCAAATGATCCTTCATTGTCAGAGGATCCCGTAAAAGCATATAATTCTGCATTTCTAGCAACAAATTCCGAACTTCATGATAGCAAGATAGATGATACTATGAGCGGTACAACTGCAATTACCGTTCTTGTTAGCGGGGACACCCTTTTCATTGCTAATGCGGGTGATTCAAGGGCTGTCGCTGCTGTTAAGAGTGGGAATCATGTTATTGCAGAGGACCTTTCATATGACCAGACGCCATTCAGAAAGGACGAATACGAGAGGGTGAAGCATTGTGGGGCCAGGGTTTTGACCGCCAATCAATTAGAAGGGCTCAAGGATCCAGGTATTCAGACTTGGGGTGATGAAGAGACTGAGGGTGGTGATCCACCAAGGCTGTGGGTACAGAATGGGATGTACCCTGGGAGTGCATTTACAAGGAGTGTGGGAGATAGTACAGCTGAGACAATTGGTGTGATTGCTGTCCCTGAGGTCTCAATGGTTCAGCTCACGTCTAATCATTTGTTCTTTGTGGTTGCGAGTGATGGGGTTTTCGAGTTCCTCTCCAGCCAAGCCGTTGTCAATATGGTGGTGCAATATACAGATCCTCGGGATGCATGTGCCGCCATCGCAGGAGAATCTTATAGGTTATGGTTAGAGCATGAAACCCGAACAGATGATATAACAATCATCATCGTACACGTCAGAAACCTAAGCAATTCAGGTGTTGATGCTACTAATGGAACTAGTGGAGTTAATATCAAGCAAGCTTTATTGGTGACGGGAAAAGGATCTGTCAACACATCGTCATTGAGAAGCGACTTCTCAGAACTGCAGCCTTGTCAACTTAATGTTCCCATCGAACGGAGTCTTGCATGTGTTGTTCCGTCTCCAACTCACCTCAGGTCCATGGAAACGTAA 1278 0.4632 MGCVHGKTCSRYPSSSDEDSRHFREVGPNGSNNIHTHRIRNHRHILADTPLEFAHVPSHDFQLEYSVLTQRGFYPESPDKENQDSFCIRTQIQGNPNLHFFGVFDGHGHFGTQCSNFVRDRLVEILSNDPSLSEDPVKAYNSAFLATNSELHDSKIDDTMSGTTAITVLVSGDTLFIANAGDSRAVAAVKSGNHVIAEDLSYDQTPFRKDEYERVKHCGARVLTANQLEGLKDPGIQTWGDEETEGGDPPRLWVQNGMYPGSAFTRSVGDSTAETIGVIAVPEVSMVQLTSNHLFFVVASDGVFEFLSSQAVVNMVVQYTDPRDACAAIAGESYRLWLEHETRTDDITIIIVHVRNLSNSGVDATNGTSGVNIKQALLVTGKGSVNTSSLRSDFSELQPCQLNVPIERSLACVVPSPTHLRSMET* 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g01179 425 SUPERFAMILY PP2C-like 52 357 IPR036457 -
Eupl07g01179 425 Pfam Protein phosphatase 2C 88 329 IPR001932 -
Eupl07g01179 425 FunFam Phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein 59 356 - -
Eupl07g01179 425 Gene3D - 57 356 IPR036457 -
Eupl07g01179 425 ProSiteProfiles PPM-type phosphatase domain profile. 64 354 IPR001932 -
Eupl07g01179 425 PANTHER PROTEIN PHOSPHATASE 80 353 IPR015655 GO:0004722|GO:0006470
Eupl07g01179 425 SMART PP2C_4 60 352 IPR001932 -
Eupl07g01179 425 CDD PP2Cc 80 354 IPR001932 -
Eupl07g01179 425 ProSitePatterns PPM-type phosphatase domain signature. 100 108 IPR000222 GO:0043169
Eupl07g01179 425 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g01179 Eupl-Chr7 31878607 31883147 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g01179 1 359 PP2C-type Phosphatase Gene Family AT3G06270 69.359 0.0 516
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g01179 - - nnu:104586863 640.958