Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g01178 ATGGGTTGTGTCCTTGCGAAGTGTTGTAGCCGTCACCCATCTTCGTCCGATGAGGATAGGCGAGAATTTCAAGAGGTTGGTCCACATGGTAGTGGTAACATCCATCTCCATGGGAACCATCGACACGTAATCGCAGAGACATCGTTGCAATTCGCCCCTATCCCTTCCCACAACTTCCATTTAGAGTACTCAGTTCTTACCCAGCGAGGCTACGACCCTGACTCCCCTCGTAAAGAAAACCAAGACAGTTTCTGCATCAGAACCCAAATTCAAGGAAACCCAAATCTCCATTTCTTTGGCGTCTTCGACGGGCACGGCCATTCTGGCACTCAATGTTCAAATTTTGTTAAGGATAGGCTGGTTGAGATCCTCTCAAATGATCATTCATTGTCACAGGATCCCGTAAAAGCATATAATTCTGCATTTCTAGCAACAAATTCTGAACTTCATGATAGCAGGATAGATGATATTATGGGCGGTACAACTGCAATTACCGTTCTTGTTAGCGGGGACACCCTTTTCATCGCAAATGTGGGTGATTCAAGGGCTGTGATTGCTGTTAAGAGTGGGAATCGAGTTATCGCAGAGAACCTATCAAATGACCAGACGCCATTCAGAAAGGATGAATACGAGAGGGTGAAGCATTGCGGCGCCACAGTTTTGACTGCCGATCAGGTACATGGACTCAAGGATCCAGATATTCAGACTTGGGGTGATGAAGAGACTGAGAGTGGTGATCCACCAAGGTTATGGTGCGTTCATGATGGGAAGCAAGTTGGGACTACAGTTACAAGGAGTATGGGAGATAGATCACATGAGAAAATTGGTGTGATTGCTGTTCCTGAGGTGTCAACGGTTCAGCTCACGCAGAATCATCTCTTCTTTGTGGTTGCCAGTGATGGGGTTTTCCAGTTCCTCACCAGCCAAGCCGTTGTCAATATGGTGGTGAGTTATACAGATCCTCAGGACGCATGTGCCGCCATCGCTGCAGAATCTTACAGGCTATGGTTAGAGCATGAAGACCGAACAGATGATATAACGATCATCATCGTTCATATCAAAAACCTACACAATTCAGGTGTGAGTGCTACTAATGGAACAAGTGGAGTTAATTTCAAGCAAGCTTTAGTGGTGACGGGAAAAGGATCTGCAAACACACATCTTTCCTTGGGGTCAGAAGCTTACCATTCATTGAGAAGCGACTTCTCAGAACTGCAACTTTGTCAACTTAATGTTCCCATCGAACAAAGTCCTGCATCTGTTGCTCCATCTCCGACACATCTCAAGTCCTTGGAAATGGTGAGTCCTTCATTCTGTGCCGGGTCCCTTATTGCATCCATTTTCCTCCAAACTTAG 1356 0.4602 MGCVLAKCCSRHPSSSDEDRREFQEVGPHGSGNIHLHGNHRHVIAETSLQFAPIPSHNFHLEYSVLTQRGYDPDSPRKENQDSFCIRTQIQGNPNLHFFGVFDGHGHSGTQCSNFVKDRLVEILSNDHSLSQDPVKAYNSAFLATNSELHDSRIDDIMGGTTAITVLVSGDTLFIANVGDSRAVIAVKSGNRVIAENLSNDQTPFRKDEYERVKHCGATVLTADQVHGLKDPDIQTWGDEETESGDPPRLWCVHDGKQVGTTVTRSMGDRSHEKIGVIAVPEVSTVQLTQNHLFFVVASDGVFQFLTSQAVVNMVVSYTDPQDACAAIAAESYRLWLEHEDRTDDITIIIVHIKNLHNSGVSATNGTSGVNFKQALVVTGKGSANTHLSLGSEAYHSLRSDFSELQLCQLNVPIEQSPASVAPSPTHLKSLEMVSPSFCAGSLIASIFLQT* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g01178 451 ProSitePatterns PPM-type phosphatase domain signature. 98 106 IPR000222 GO:0043169
Eupl07g01178 451 Gene3D - 53 356 IPR036457 -
Eupl07g01178 451 MobiDBLite consensus disorder prediction 12 36 - -
Eupl07g01178 451 PANTHER PROTEIN PHOSPHATASE 77 352 IPR015655 GO:0004722|GO:0006470
Eupl07g01178 451 Pfam Protein phosphatase 2C 78 331 IPR001932 -
Eupl07g01178 451 SMART PP2C_4 58 351 IPR001932 -
Eupl07g01178 451 MobiDBLite consensus disorder prediction 12 26 - -
Eupl07g01178 451 ProSiteProfiles PPM-type phosphatase domain profile. 62 353 IPR001932 -
Eupl07g01178 451 SUPERFAMILY PP2C-like 54 356 IPR036457 -
Eupl07g01178 451 FunFam Phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein 57 355 - -
Eupl07g01178 451 CDD PP2Cc 77 353 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g01178 Eupl-Chr7 31851274 31855719 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g01178 1 358 PP2C-type Phosphatase Gene Family AT3G06270 65.363 4.08e-165 467
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g01178 - - ming:122091936 622.083