Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g01160 ATGGCGGTCTCTAACCCATTATCCATTTCGTTGCACAAGCTCGATTCCTCCTCGTTTAACACTAGTACGGTTGTCGCCTTAGTCGTGTTCTTCACCCTCCTTTGCGCCTGTATTGTGATTGGTCATCTACTCGAAGAGAATCGATGGGCAAACGAATCGATCACTGCTCTTATTCTGGGTTTATGCACTGGTCTGGTGGTTTTGCTGGTGAGTAAAGGCAAGAACTCGCACTTACTTGTTTTCAGTGAGGAGCTGTTCTTCATTTATCTGCTCCCTCCGATCATTTTCAATGCTGGTTTCCAGGTCAAGAAAAAACAATTTTTTCACAACTTCTCAACAATATTGTTATTTGGAGTGGTCGGAACACTGATATCTTTCTGCATCATTTCGCTAGGTGGATATTTTCTATTTAAGAAGATGGGCGTGACATCCTTGAAGATTCAGGATCACCTAGCTGTCGGTGCCATATTTTCGGCCACAGATTCAGTTTGCACGTTGCAGGTCCTCAATCAAGATGAAACACCCTTACTTTACAGTCTTGTATTCGGGGAGGGAGTAGTGAATGATGCTACCTCTATTGTACTTTTCAATGCAGTCCAAACACTTGACTTCAGCAACATTGATGCTGTCACGGCCTTAAAACTATTGGGGACCTTCCTTTACCTCTTCTTCACAAGTACTATACTTGGTATAGCAGTGGGGCTTATCAGTGCTTATGTCATAAAGACACTATACTTTGGAAGGCATTCCACAGATCGTGAAGTTGCTATCATGATGCTTATGGCTTACTTGTCATACATGTTGGCTGAGCTCTTATCTCTCAGTGGGATTTTGACAGTTTTCTTTTGTGGCATTGTCATGTCACACTATACATGGCATAACGTTACTGAGAGCTCACGGATAACAACCAAGCATGCATTTGCAACGATGTCATTTATTGCAGAAACTTTTATATTCCTATATGTTGGTATGGATGCCTTAGACATTAGCAAATGGAAAGCAAGCGATGCTAGTGCAGGAACTTCAGTTGCTGTCAGTTCGACGTTAATTGGTTTAGTTTTGGTTGGAAGGGCTGCATTTGTGTTCCCTCTTGCAAATATTGCAAATTGGTTGAAAAGCAGAAACAGTACAAAGATTGAGTTCCGTCAGCAGTTTATAATTTGGTGGGCAGGCCTAATGAGAGGTGCAGTTACTATTGCTTTATCTTATAACCAGTTTGCAGATTCTAACTCATCGGGATCGAAAGATTGTGCACTTGTGATCACTAGTACCATAATTGTTGTCCTCTTCAGTACAGTGGTATTTGGATCGATAACAAAGCCTCTGATTAAAGCCATGCTGTTTCGACACTTGAAACCACCAAATGCAGATGCATCCGAATCCACCAGCTTAGAAGACATACGACTCTTGTTTCTTGAAAATGGAGGGCCAAGTGATGAAGGCAGCCATCAACGACCCCGTAGAAGAAGTAGCTTGAGCTTACTAATCAAATATCCCACATCAACTGTTCACTACTTCTGGAGGAAGTTTGATGATAGATACATGAGACCATTGTTTGGGGGACGGGGTTTTGTTCCATTTGTTCCTAGTTCACCAACTGGTGCACAAGACGAAATTTCTTGA 1623 0.4208 MAVSNPLSISLHKLDSSSFNTSTVVALVVFFTLLCACIVIGHLLEENRWANESITALILGLCTGLVVLLVSKGKNSHLLVFSEELFFIYLLPPIIFNAGFQVKKKQFFHNFSTILLFGVVGTLISFCIISLGGYFLFKKMGVTSLKIQDHLAVGAIFSATDSVCTLQVLNQDETPLLYSLVFGEGVVNDATSIVLFNAVQTLDFSNIDAVTALKLLGTFLYLFFTSTILGIAVGLISAYVIKTLYFGRHSTDREVAIMMLMAYLSYMLAELLSLSGILTVFFCGIVMSHYTWHNVTESSRITTKHAFATMSFIAETFIFLYVGMDALDISKWKASDASAGTSVAVSSTLIGLVLVGRAAFVFPLANIANWLKSRNSTKIEFRQQFIIWWAGLMRGAVTIALSYNQFADSNSSGSKDCALVITSTIIVVLFSTVVFGSITKPLIKAMLFRHLKPPNADASESTSLEDIRLLFLENGGPSDEGSHQRPRRRSSLSLLIKYPTSTVHYFWRKFDDRYMRPLFGGRGFVPFVPSSPTGAQDEIS* 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g01160 540 PRINTS Na+/H+ exchanger signature 85 96 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Eupl07g01160 540 PRINTS Na+/H+ exchanger signature 114 122 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Eupl07g01160 540 PRINTS Na+/H+ exchanger signature 154 164 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Eupl07g01160 540 PRINTS Na+/H+ exchanger signature 99 113 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Eupl07g01160 540 Pfam Sodium/hydrogen exchanger family 27 444 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Eupl07g01160 540 Gene3D - 145 198 - -
Eupl07g01160 540 PANTHER SODIUM/HYDROGEN EXCHANGER 13 519 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
Eupl07g01160 540 NCBIfam sodium/hydrogen exchanger 3 26 452 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g01160 Eupl-Chr7 31622339 31631635 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g01160 8 533 Antiporters AT3G05030 65.549 0.0 701
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g01160 K14724 - nnu:104613039 847.04