Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g01150 ATGGATAAGTCTCAATCGTTCTTGTTCTCAGGCATCCATTTCGATCGAAAGAAGTTCTCCAGTGATTTTGCCAGATTCAAGGAGAAAAATGAGAGTGAGAATTCCCCGGAAAATCTGAGCTTGGTGGAAACTGGAAAAGCTGAATTAGAGGAGGGGATTGTGTCTGGGAAGAAGAGAAAGCGGAAGGCGAAGGTTTCCGAAAGGGTGGAAGGATTCAGTGTCTTCAAGATTTCAGAATCTGCAGCTGCAACCGAACAGAAAGACAAGGAGGAAAATGAGGGTTCTCGAGAAATGAAGGAAATGAATAGACAAATTGAGCGAGATGCTCTGTTGCGTAAGAAGCATGGGATTCATATTTCTGGGCATAGTGTCCCATCTCCGCTTCAGAATTTTGCAGAGTTAAGCTCAAGGTATAGCTGTAAACCAAATTTATTGCGCAATTTAGCAGAACTTGGATTTAAAGAACCAACACCAATCCAAAGGCAGGCTATTCCAGTCCTCCTCTCTGGGCGAGAGTGCTTTGCTTGCGCACCGACAGGTTCTGGCAAGACTTTGGCTTTCTTATGCCCTATACTTGTGAAACTTGAGCCGGGAGTGAAGGATGTTATCCAAGCTCTAATCCTCTGTCCTACACGGGAATTAGCTGCACAGACAACCAGAGAGTGCAAGAAGTTGGCTAAAGGAAAGAAAATTTATACTAAGTTAATGACTAAGGAGCTGTCCAAAAGTGGCAACTTTGAGAAAATGCGTTGTAATATACTTGTATCCACTCCACTTCGCTTACAGTTTGCTATTCGCAAAAGAAAACTTGATTTGAGCAGGGTGGAGTACCTTGTCCTAGATGAATCTGACAAGCTATTTGAGCTTGGCTTTGTTAAGCAAATTGATTCTGTGGTCAAAGCATGCTCAAATCCTTCAATAATACGTTCATTGTTTAGCGCCACTTTACCTGATTCTGTTGAGGAACTTGCACGCACAATAATGCATGATGCAGTTCGAGTTATTGTGGGCAGGAAGAATTCTGCTTCGGAATTGATAAAGCAAAAGCTGGTTTTTGCTGGAAGTGAAGAAGGGAAGCTGCTTGCACTTAGGCAAAGTTTTGCAGAGAGTCTGAACCCACCTGTACTAGTGTTTGTCCAAAGCAAGGAACGGGCAAAGGAGCTTTACAGAGAGCTGGCATTGGAAAACATTAGAGTTGATGCTATACATGCAGATCTGTCCCAGACACAGCGAGAAGATGCAGTCGATAACTTCAGGGCAGGGAAAACATGGGTTTTAATTGCCACTGATGTTATTGCTCGAGGTATGGACTTCAAGGGCATCAACTGTGTGATTAATTACGATTTCCCTGAATCTGCTGCAGCATATATACATCGGATAGGTCGGTCCGGCAGAGCAGGGCGGATTGGGGAAGCTGTTACTTTATACACGGAAGATGATGTACCATTTTTGCGGAACATAGCCAATGTGATGGCAGCTTCGGGCTGTGAGGTTCCATCATTTATCATGGCATTGCCTAAGCTCAGGAGGAAGAAACATCGGCCGCAGAGAGATTCTATTTCAACCAAACCGAAAGACCAGGAGGAAGAACGAGACAATGATCAGAGCTAG 1611 0.4407 MDKSQSFLFSGIHFDRKKFSSDFARFKEKNESENSPENLSLVETGKAELEEGIVSGKKRKRKAKVSERVEGFSVFKISESAAATEQKDKEENEGSREMKEMNRQIERDALLRKKHGIHISGHSVPSPLQNFAELSSRYSCKPNLLRNLAELGFKEPTPIQRQAIPVLLSGRECFACAPTGSGKTLAFLCPILVKLEPGVKDVIQALILCPTRELAAQTTRECKKLAKGKKIYTKLMTKELSKSGNFEKMRCNILVSTPLRLQFAIRKRKLDLSRVEYLVLDESDKLFELGFVKQIDSVVKACSNPSIIRSLFSATLPDSVEELARTIMHDAVRVIVGRKNSASELIKQKLVFAGSEEGKLLALRQSFAESLNPPVLVFVQSKERAKELYRELALENIRVDAIHADLSQTQREDAVDNFRAGKTWVLIATDVIARGMDFKGINCVINYDFPESAAAYIHRIGRSGRAGRIGEAVTLYTEDDVPFLRNIANVMAASGCEVPSFIMALPKLRRKKHRPQRDSISTKPKDQEEERDNDQS* 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g01150 536 MobiDBLite consensus disorder prediction 509 536 - -
Eupl07g01150 536 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 164 334 IPR014001 -
Eupl07g01150 536 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 362 506 IPR001650 -
Eupl07g01150 536 SMART helicmild6 386 467 IPR001650 -
Eupl07g01150 536 Gene3D - 72 333 IPR027417 -
Eupl07g01150 536 Pfam Helicase conserved C-terminal domain 363 467 IPR001650 -
Eupl07g01150 536 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 204 487 IPR027417 -
Eupl07g01150 536 CDD SF2_C_DEAD 346 476 - -
Eupl07g01150 536 Gene3D - 334 508 IPR027417 -
Eupl07g01150 536 PANTHER ATP-DEPENDENT RNA HELICASE RHLE-RELATED 84 507 - -
Eupl07g01150 536 MobiDBLite consensus disorder prediction 519 536 - -
Eupl07g01150 536 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 133 161 IPR014014 GO:0003724
Eupl07g01150 536 SMART ultradead3 152 349 IPR014001 -
Eupl07g01150 536 Pfam DEAD/DEAH box helicase 157 323 IPR011545 GO:0003676|GO:0005524
Eupl07g01150 536 CDD DEADc_DDX52 144 337 IPR044764 GO:0003724|GO:0005524|GO:0030490
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g01150 Eupl-Chr7 31480951 31487601 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g01150 127 499 Eukaryotic Initiation Factors Gene Family AT3G19760 33.333 6.53e-61 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g01150 K14779 - nnu:104596401 870.537