Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g01137 ATGGATCCCGAAGCTGATCCTCCCAAAACCATAAGCGTAAGGCACAAATGCTCAGCATGCTACAAGCAGTACAAGAAGAAGGAGCATCTTATTGAGCATATGAGGGTTTCATATCACTCGGTTCATCAGCCTAAGTGTGGAGTCTGTAAAAAGCATTGCAAATCGTTCGAGTCGCTGAGGGAACATGTTACTGGTCCTTTGCCCAAAGCCAATTGTGCGAAGATCTTTACTGTCCAAGGTTGTGATCTTTGCATGAACATCTTCGATAACTCCGATAATCTCAATGCGCATAAAGAAATGTGTTGCTTATCTCCCCCAGCTCCCCTTGAACCAGTCAAAATGCCTTCCATAGAATCTGCAATGGAAATTTCAGGCTTAACTGAGGCAAACTACACTAGCCAAGATCCTGAAGTGGTAGCTGTAGACTGTGAGATGGTTGGGGGTGGAAGTGATGGGTCACTTGATCTTTGTGCCAGGGTGTGCCTCATTGACGAAGGTGAGAATGTGATATTCCACACGTACGTGCAACCTCAAATTCCTGTCACCAACTACAGATATGAAATAACTGGTATAACAGAGGAGCATTTGAGAGATGCAATGCCGCTCAAACAAGTTCAAGAGAGAATTGAGGAGATCTTGAACAATGGAGAGTCCATCTGGAGAATGCGGTTGGAAGGTGGAAAGGCTAGGCTTCTCGTGGGTCACGATCTTGATCACGATTTAGATTGCTTGAGAATGAATTACCCTGACCACTTGTTGAGGGATACTGCCAAATATCGTCCTTTGATGAAAACAAATCTGATTAGCCACTCGCTCAAGTACCTCACAAGAACATATTTAGGGTACGAGATTCAGTCGGGAACACATGACCCATATGAGGATTGTGTAGCTGCAATGAGGCTTTATAAAAGAATGTGCGCACAGGTTCATCCAATGGACGGGATAGCAACGTCAAATGTCACATATTATACCAACAGCTTTGATTCCTGGAGACGAAAGGAACTCGAGAATATGTCCCCAGATGCCCTTTTTGGGATTTCACGATCAAATTATAGGTGTTGGTGCTTGGATTCCAGAAACAGGTTAATATTACAATCTTGA 1101 0.4387 MDPEADPPKTISVRHKCSACYKQYKKKEHLIEHMRVSYHSVHQPKCGVCKKHCKSFESLREHVTGPLPKANCAKIFTVQGCDLCMNIFDNSDNLNAHKEMCCLSPPAPLEPVKMPSIESAMEISGLTEANYTSQDPEVVAVDCEMVGGGSDGSLDLCARVCLIDEGENVIFHTYVQPQIPVTNYRYEITGITEEHLRDAMPLKQVQERIEEILNNGESIWRMRLEGGKARLLVGHDLDHDLDCLRMNYPDHLLRDTAKYRPLMKTNLISHSLKYLTRTYLGYEIQSGTHDPYEDCVAAMRLYKRMCAQVHPMDGIATSNVTYYTNSFDSWRRKELENMSPDALFGISRSNYRCWCLDSRNRLILQS* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g01137 366 Gene3D Classic Zinc Finger 4 65 - -
Eupl07g01137 366 SUPERFAMILY Ribonuclease H-like 138 306 IPR012337 -
Eupl07g01137 366 ProSiteProfiles Zinc finger C2H2 type domain profile. 15 44 IPR013087 -
Eupl07g01137 366 ProSitePatterns Zinc finger C2H2 type domain signature. 17 39 IPR013087 -
Eupl07g01137 366 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 18 317 IPR047021 GO:0004527
Eupl07g01137 366 CDD REX4_like 139 303 IPR037431 GO:0006364|GO:0008408
Eupl07g01137 366 SMART exoiiiendus 137 311 IPR013520 -
Eupl07g01137 366 Gene3D - 132 318 IPR036397 GO:0003676
Eupl07g01137 366 Pfam Exonuclease 139 302 IPR013520 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g01137 Eupl-Chr7 31346388 31352518 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g01137 1 358 C2H2 Transcription Factor Family AT3G27970 55.153 6.55e-148 420
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g01137 K18327 - nnu:104612826 602.438