Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g01112 ATGTACATATGGATTACAAAGAAAAGGTCGGCCAAGACCCGCCCTAACACTGGTTCAGAACCAACCATGTCGCATATAGCTGTGGAGAGAAACAGAAGAAAGCAAATGAACGAGCATCTTAAGGTTTTACGCTCCTTGACACCATGTTTCTATGTCAAAAGAGGAGACCAAGCATCTATTATAGGGGGAGTAATAGAATTCATCAAGGAGTTGCACCAAATTCTGCATTCTTTGGAATCTAAGAAACAAAGAAAGAGCTTAAGCCCTAGCCCTGGTCCTAGCCCAAGGCCATTACAGTTAACTCCACCACCTGATATCCCTCTTGGGTTTGAAAATGTTAAAGAGCTCGGGGCATGTTGCAACTCTTCAGTTGCAGATGTGGAGGCAAAAATATCCGGCTCAAACGTCATTCTGAGAACCATTTCTCGCCGAATCCCAGGCCAAATTGCAAAGATAATCACAGTCTTAGAGAAACTTTCGTTCGAGATTCTCCATCTGAACATTAGTAGCATGGAAGACACTGTTCTCTACTCTTTTGTGATTAAGATCGGACTTGAATGCCAGCTTAGTGTGGAGGAATTGGCTCTTGAAGTTCAACAAAGCTTCTCCTAA 612 0.4297 MYIWITKKRSAKTRPNTGSEPTMSHIAVERNRRKQMNEHLKVLRSLTPCFYVKRGDQASIIGGVIEFIKELHQILHSLESKKQRKSLSPSPGPSPRPLQLTPPPDIPLGFENVKELGACCNSSVADVEAKISGSNVILRTISRRIPGQIAKIITVLEKLSFEILHLNISSMEDTVLYSFVIKIGLECQLSVEELALEVQQSFS* 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g01112 203 CDD bHLH_AtFAMA_like 23 85 - -
Eupl07g01112 203 PANTHER TRANSCRIPTION FACTOR FAMA 8 202 IPR044283 GO:0003700|GO:0010052
Eupl07g01112 203 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 20 71 IPR011598 GO:0046983
Eupl07g01112 203 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 21 89 IPR036638 GO:0046983
Eupl07g01112 203 Pfam Helix-loop-helix DNA-binding domain 23 71 IPR011598 GO:0046983
Eupl07g01112 203 MobiDBLite consensus disorder prediction 81 104 - -
Eupl07g01112 203 Gene3D - 12 86 IPR036638 GO:0046983
Eupl07g01112 203 SMART finulus 26 77 IPR011598 GO:0046983
Eupl07g01112 203 FunFam Transcription factor MUTE 23 88 - -
Eupl07g01112 203 MobiDBLite consensus disorder prediction 90 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g01112 Eupl-Chr7 30906391 30907999 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g01112 23 202 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G06120 68.229 3.27e-86 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Eupl07g01112 HLH 2e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g01112 - - nnu:104596645 296.204