Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g01111 ATGGAAGAAATTTATAAAAGCAAAGTAACCGCACTTCTGCATGCATTCTACGCGACAAAATATGTAAAAGAGGACAACATTCCATGCCAAATTGAAGAGGGTCTCTTCTTGGGTTCTCTTGGAGCTGCGTATAACAAGGATGCATTGAAAAGTTTGAATATCACTCATATCTTAATTGTGGCCAATTCATTAGGGCCCGCATATCCAAATGATTTCGTATATAAGAAAATTGAAGTTGCGGACAGAGAAGAAACAGATATAGCACAGTATTTTGATGAGTGCTTTGATTTCATTGATGAAGCTAAAAAGATGGGCGGTGGCGTGTTGGTTCATTGTTTTGCGGGAAAATCCAGAAGTGTCACAATTGTTGTTGCTTATTTGATGAAAAAGCACCGGATGAGGCTATCTCAAGCTTCTGAACATGTTAAGAGTAAACGGCCGCTAGCAGCACCTAATCGTGGTTTCATGTTACAACTACAGAAATTTGAGAAATCCCTTGGAGGGCTGCAGTTTTTGGAAAAGAATACGACCTCAGGCATTACAAGATTATGA 552 0.3931 MEEIYKSKVTALLHAFYATKYVKEDNIPCQIEEGLFLGSLGAAYNKDALKSLNITHILIVANSLGPAYPNDFVYKKIEVADREETDIAQYFDECFDFIDEAKKMGGGVLVHCFAGKSRSVTIVVAYLMKKHRMRLSQASEHVKSKRPLAAPNRGFMLQLQKFEKSLGGLQFLEKNTTSGITRL* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g01111 183 ProSiteProfiles Dual specificity protein phosphatase domain profile. 27 168 IPR020422 GO:0006470|GO:0008138
Eupl07g01111 183 CDD DSP 28 161 - -
Eupl07g01111 183 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 27 166 IPR029021 -
Eupl07g01111 183 SMART dsp_5 27 165 IPR020422 GO:0006470|GO:0008138
Eupl07g01111 183 FunFam Dual specificity phosphatase 12 29 177 - -
Eupl07g01111 183 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE 25 172 - -
Eupl07g01111 183 Pfam Dual specificity phosphatase, catalytic domain 35 164 IPR000340 GO:0008138|GO:0016311
Eupl07g01111 183 PRINTS Atypical dual specificity phosphatase family signature 90 101 - -
Eupl07g01111 183 PRINTS Atypical dual specificity phosphatase family signature 49 60 - -
Eupl07g01111 183 PRINTS Atypical dual specificity phosphatase family signature 74 83 - -
Eupl07g01111 183 PRINTS Atypical dual specificity phosphatase family signature 32 44 - -
Eupl07g01111 183 Gene3D Protein tyrosine phosphatase superfamily 29 179 IPR029021 -
Eupl07g01111 183 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 89 147 IPR000387 GO:0016311|GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g01111 Eupl-Chr7 30886168 30901468 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g01111 30 168 Protein tyrosine phosphatase (PTP) family AT3G06110 65.468 4.99e-63 190
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g01111 - - msin:131230405 257.299