Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g01099 ATGTTTTCTGTTCGACTCTCAAATCATGGGATTGGGCTTGTAAATAATGGGGTTTTTAACAACATTGGTTTTGCTACTGAGAAATTTTCGCTTGGGCATTTGTTTTGTTTTGGAATTCAATTTCATTTATGCTGTTACTTTTTTTTTTTACTAATTATGTGGGTGTTCTTATTTATTTATTTATTTTGTCTTGTTTGCACTAAAACCAGAAACATAAAGATTTGTCTTTTGAGTGCTCTGAACACAATGGATCAGCAAGGGCATGGACAGCCCCATGTCATGGGGGTGGTTGGCAGTGCAGCTCAAATGCCGTATGGTACAACCCCATATCAGTCTAACCAAATGATTGGGGCCACCCCCCCTGGCTCAGTAGGATCCATTCAGTCTCCCGGTCAGCAAACAGGTTTCACTGCTTCCCCAGCTCACCTCGCACAACACCAACTTGCTTATCAACATGTCCACCAGCAGCAGCAACAGCAACTGCAGCAACAACTACAGGGTTTTTGGGTGAACCAATACCAAGAAATCGAGCAGACAACTGACTTTAAGAACCACAGCCTGCCGTTGGCAAGGATCAAGAAGATCATGAAGGCAGACGAGGATGTAAGGATGATAGCTGCAGAGGCTCCAGTCATATTTGCCAGAGCCTGTGAGATGTTCATCTTGGAGTTGACACTCCGTTCGTGGAATCACACAGAAGAGAACAAGCGGCGGACACTTCAAAAGAATGACATTGCAGCAGCAATCACGAGGACTGATATCTTTGACTTCCTGGTTGACATTGTGCCAAGGGAGGATCTTAAAGATGAGGTGCTTGCATCAATGCCAAGAGGAGGGGCCCTGCCGGTCGGAGGTCCAGCTGACGCGCTTCCTTACTACTATATGCCACCTCAGCATTCATCACAGGTTGGAACTCCAGGGATGATCATGGGTAAACCTGTGGTGGATCAAGCTTTGTATGCCCAGCAGCCTCGCCCTTACATGGCTCAGCAGATGTGGCCGCAGCCACCACAGCAACAGCAGGCAGATTCTTGA 1035 0.4667 MFSVRLSNHGIGLVNNGVFNNIGFATEKFSLGHLFCFGIQFHLCCYFFFLLIMWVFLFIYLFCLVCTKTRNIKICLLSALNTMDQQGHGQPHVMGVVGSAAQMPYGTTPYQSNQMIGATPPGSVGSIQSPGQQTGFTASPAHLAQHQLAYQHVHQQQQQQLQQQLQGFWVNQYQEIEQTTDFKNHSLPLARIKKIMKADEDVRMIAAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLASMPRGGALPVGGPADALPYYYMPPQHSSQVGTPGMIMGKPVVDQALYAQQPRPYMAQQMWPQPPQQQQADS* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g01099 344 Gene3D Histone, subunit A 148 264 IPR009072 GO:0046982
Eupl07g01099 344 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 147 288 - -
Eupl07g01099 344 FunFam Nuclear transcription factor Y subunit gamma 151 264 - -
Eupl07g01099 344 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 186 249 IPR003958 -
Eupl07g01099 344 SUPERFAMILY Histone-fold 150 258 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g01099 Eupl-Chr7 30773806 30774840 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g01099 83 333 CCAAT-HAP5 Transcription Factor Family AT1G08970 60.714 4.68e-87 260
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Eupl07g01099 CBFD_NFYB_HMF 1.2e-17 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g01099 K08066 - nnu:104612503 399.823