Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g01082 ATGGCTGCTCCGCCAAGTAGTCGGCTACAACAGATGTTGCAGTCGGCAGTTCAAGCGGTTCAGTGGACTTACAGTCTCTTCTGGCAAGTCTGTCCACAACAAGGGATCTTAGTGTGGGGTGATGGGTACTACAATGGAGCTATAAAGACGAGGAAGACTGTGCAACCAATGGAGGTGAGCGCCGAGGAGGCGTCGCTTCAAAGAAGCCAACAGCTTAGAGAGCTTTATGAATCGTTGTCAGCCGGGGAGACGAACCAGCCAGCTCGTCGGCCTTGCGCTGCGTTGTCACCGGAGGACTTGACGGAGTCGGAGTGGTTCTTCCTTATGTCTGTCTCCTTTACTTTCCCACATGGAGTAGGGTTACCAGGAAAGGCACTTGCTAAGCAGCATCATGTCTGGCTTACCGGCGCCAATGAGGCCGACAGCAAACTCTTTTCTCGAGCCATTCTTGCCAAGAGTGCTCGTATACAGACAGTCCTATGCATTCCTCTCATGGACGGTGTTGTTGAATTCGGCACAACAGAAAGGGTGCAAGAGGACCTTGGACTGATCCAACATGTCAAGAGCTTCTTTGTTGACCACCGACACCACCCAAAACCGGCTCTCTCCGAGCATTCAACCTCCAATCCAGCTGCGTCGTCGGAGCAGCCGCCTTTCCACTCTCCACCGCTCCCTATCATGTACTCAGCGGCGGACCCACCTGCCAATACAAACCAAGAAGACGAGGAAGAAGACGAGGAAGAAGAAGAGGAAGAAGAAGAAGAGGAGGAGGAAGAAGAAGCTGACTCTGACTCGGAAGCTGAAACGGGTCGGAATAACCACCCAACTGCCGCACAAGACCCTCTACAGGTAATCGAGCCGATCAGTCAGGGTGTAGCTACGGGTCAACCCGCAGCTGAGCCAAGCGAGCTAATGCAACTTGATATGTCTGAGGACATTCGGCTTGGCTCGCCGGATGATGGCTCTAATAACTTAGACTCTGACTTGCACATTCTCGCTGTGAACCAATCTGGCAACCAAGCCGATCGTCAGCGTCGAGCCGGGTCGGTTCAACGGTGGCCTCTCTTGCAGGACCAGCTCAGCAACGGTCTTCAACCACCAGCTTCAGGAGCCGCTCAAATAGATGAATCTACACCGGAGGACACCCACTACTCCCAAACAGTCTCAACTATCCTCCAACAAAATTCAGTCCGGTGGACAGAATCTTCATCGGTCGGTTACATCGGACACACTCAACAATCAGCATTTGCTAAGTGGAGTTCCCGGAATGATACCCTCCTCCACATACCGTTAGATGGTACATCACAGTGGCTCCTCAAGTACATCCTCTTCAGTGTCCCTTTCTTACACAATAAGTACCGAGACGAGAACTCTCCGAGATCTCGAGACGGCGATGCAGTGACCCGATTACGCAAGGGTACCCCACAAGACGAGTTGAGTGCCAACCATGTCCTCGCTGAACGACGGCGACGAGAGAAGCTCAACGAGAGGTTTATCATCCTACGGTCACTAGTCCCCTTTGTCACCAAGATGGATAAGGCCTCGATCCTTGGTGACACGATCGAGTACGTTAAACAGCTTCGGAGAAAGATACAAGATCTCGAGTCACGTAATCGAGTGATGGAGGGAGATCAACGGTCCAAAGGTGGGGATACTCAGAAGACTGGTACTTCAAAAGAGCAGCGAAGTGTGCATGGGAATAGTTGTGCTATGGTGCTGGATCGGGTAGGGTTATTACCCGGGTCCGATAAGAGGAAGTTGAGGATAGTAGAAGGTAGCAGTGGTGCAAAGACTAAAGTGGTTGATGTACCACCAAACGTACAGGTGTCGATCATCGAGTGTGATGCACTATTAGAATTGAAGTGTCCGTACAGAGAAGGGTTATTGCTCGAGATCATGCAGACACTTCGAGAGCTCCGGTTGGAGATCACAGCCGTTCAATCTTCATCTACCAATGGCATCTTTGTCGCGGAGTTGCGAGCTAAGGTGAAGGAGAATGTTAATGGAAAGAAGGTGACTATCGTGGAAGTAAAAAGGGCGATACACCAAATCATATCTCAATACTAA 2067 0.5109 MAAPPSSRLQQMLQSAVQAVQWTYSLFWQVCPQQGILVWGDGYYNGAIKTRKTVQPMEVSAEEASLQRSQQLRELYESLSAGETNQPARRPCAALSPEDLTESEWFFLMSVSFTFPHGVGLPGKALAKQHHVWLTGANEADSKLFSRAILAKSARIQTVLCIPLMDGVVEFGTTERVQEDLGLIQHVKSFFVDHRHHPKPALSEHSTSNPAASSEQPPFHSPPLPIMYSAADPPANTNQEDEEEDEEEEEEEEEEEEEEEADSDSEAETGRNNHPTAAQDPLQVIEPISQGVATGQPAAEPSELMQLDMSEDIRLGSPDDGSNNLDSDLHILAVNQSGNQADRQRRAGSVQRWPLLQDQLSNGLQPPASGAAQIDESTPEDTHYSQTVSTILQQNSVRWTESSSVGYIGHTQQSAFAKWSSRNDTLLHIPLDGTSQWLLKYILFSVPFLHNKYRDENSPRSRDGDAVTRLRKGTPQDELSANHVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRRKIQDLESRNRVMEGDQRSKGGDTQKTGTSKEQRSVHGNSCAMVLDRVGLLPGSDKRKLRIVEGSSGAKTKVVDVPPNVQVSIIECDALLELKCPYREGLLLEIMQTLRELRLEITAVQSSSTNGIFVAELRAKVKENVNGKKVTIVEVKRAIHQIISQY* 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g01082 688 MobiDBLite consensus disorder prediction 360 382 - -
Eupl07g01082 688 Pfam Helix-loop-helix DNA-binding domain 481 528 IPR011598 GO:0046983
Eupl07g01082 688 MobiDBLite consensus disorder prediction 237 265 - -
Eupl07g01082 688 Gene3D - 473 543 IPR036638 GO:0046983
Eupl07g01082 688 MobiDBLite consensus disorder prediction 197 280 - -
Eupl07g01082 688 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 480 543 IPR036638 GO:0046983
Eupl07g01082 688 Coils Coil 517 544 - -
Eupl07g01082 688 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 9 191 IPR025610 -
Eupl07g01082 688 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 478 527 IPR011598 GO:0046983
Eupl07g01082 688 Coils Coil 235 267 - -
Eupl07g01082 688 SMART finulus 484 533 IPR011598 GO:0046983
Eupl07g01082 688 MobiDBLite consensus disorder prediction 455 475 - -
Eupl07g01082 688 MobiDBLite consensus disorder prediction 535 555 - -
Eupl07g01082 688 MobiDBLite consensus disorder prediction 535 565 - -
Eupl07g01082 688 MobiDBLite consensus disorder prediction 455 472 - -
Eupl07g01082 688 PANTHER TRANSCRIPTION FACTOR TT8 3 687 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g01082 Eupl-Chr7 30532648 30542375 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g01082 314 685 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G09820 38.095 1.30e-57 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Eupl07g01082 bHLH-MYC_N 6.6e-52 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g01082 - - nnu:104596450 992.26