Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g01047 ATGGAGCAGCAGCAGAGGCGCCGAGAACAGCAAACCGTCCCAGAGAGGAAAGGGCAAAAGCGGAAACTGGAGGAAGAAGTCGAAGAAGAACGAGAGATCTCTCTCACCTCTCCCGCCGCCCACCAAGCGCTAGCCTGCGAGTTGAGTGCGCAGGTTAACATCCTTAACACCACCTTCTCTTGGAAAGAAACCGATCGAGCCGCCGCCAAGCGCGCCACTCATGTTCTTGCCGAGTTCGCCAAAAACGAAGAAGTTGTGAATGTTATTGTTGATGGCGGTGCGGTTGCGGCTCTGGTGAAGCATCTTCAGGCGCCGCCTCCTTCTCTCGACGGTGACAATAACCAGAAGCCGTTCGAGCACGAGGTCGAGAAAGGGAGCGCCTTCGTTCTCGGGCTTCTCGCTGTTAAGCCAGAGCATCAGCAACTCATAGTTGATGCTGGCGCTTTGTCTCATCTTGTGGACCTGTTAAAGAGGCACAGGGATGGTTATAACTCTCGGGCAGTCAATAGTGTTATTCGGAGTGCGGCTGATGCAATTACTAGCCTTGCCCATGAGAATAGCAGTATTAAAACCCGTGTCAGGAAGGAAGGGGGGATTCCGCCACTTGTTGAGTTGCTTGAGTTCATTGATACAAAAGTACAGAGAGCGGCTGCTGGAGCCCTGCGAACCTTGGCGTTTAAAAACGATGAAAACAAGAATCAGATTGTGGAATGCAATGCTCTTCCTACCCTCATTCTAATGCTCCGATCTGAGGATGCTGCTATACATTATGAGGCGGTTGGTGTGATCGGGAATCTGGTTCACTCCTCCCCAAACATAAAGAAAGAAGTGCTCATTGCTGGAGCTTTACAACCTGTTATTGGATTACTAAGTTCCTGCTGTTCGGAGAGCCAAAGGGAGGCAGCTTTGTTACTTGGACAATTTGCTGCGACAGATTCAGATTGCAAGGTGCACATTGTGCAGAGAGGCGCCGTCCGCCCTCTGATTGAGATGCTTCAATCCCCAGATGTACAGCTTAGGGAAATGTCTGCCTTTGCACTGGGGAGGTTGGCACAGGACACACACAACCAAGCTGGGATTGCTCACAATGGTGGTCTACTGCCACTGCTGAAGCTTCTTGACTCAAAAAATGGGTCTCTGCAACACAATGCCGCATTTGCTCTTTATGGTCTTGCAGAGAATGAGGACAATGTTTCCGATTGTATCAAGGTGGGAGGTGTTCAGAAGCTGCAAGATGGAGAGTTCATTGTTCAAGCAACCAAAGATTGTGTAGCAAAGACATTGAAAAGATTAGAAGAGAAGATCCATGGAAGAGTATTGAACCATTTGTTATATCTGATGCGCGTAGCAGAGAAGGTTGTTCAACGGCGAGTTGCATTGGCTCTTGCTCATGTTTGTTCCCCTGACGATCAGAGAACGATATTCATTGATAACAATGGATTGGAGTTGCTTTTGGGGCTTCTTACTTCTGCAAGCCCAAAGCAGCAGCAAGATGGATCTGTTGCCTTGTACAAGTTGGCTAACAAAGCCTCATCGCTCTCTCCTATGGATGCAGCTCCTCCATCTCCAACGCCACAGGTCTATCTGGGTGAACAGTATGTAAACAAAGCTACACTATCCGATGTTACCTTTCTAGTTGAAGGTTGTAAGCGGTTCTATGCTCACAGAATTGCTCTGCTTGCTTCTTCGGATGCATTCCGTGCAATGTTTGATGGTGGCTACAGGGAGAAGGATGTGAGAGACATAGAGATACCCAATATAAGATGGGAGGTATTTGAGTTGATGATGAGATTCATATACACAGGATCCGTCGATGTAACGTTAGATATTGCGCAGGATCTCCTCAGAGCTGCAGATCAGTATCTTTTAGAGGGACTAAAGCGTCTCTGTGAGTATGCCATTGCACAGGATATTTCTCTGGACAATGTTTCAAATATGTATGAACTTTCAGAGGCCTTTCATGCTATATCATTAAGGCACACCTGCATCTTATTCATTCTGGAGCAGTTCGATAAATTGAGTACTAAACCGTGGCACTCTTCTCTGATCCAACGTGTAATACCGGAGATTCGTAACTACTTCTCCGGAGCACTTACTAAGCCTAACCAACGAAACTTCCGGCTATAG 2127 0.4758 MEQQQRRREQQTVPERKGQKRKLEEEVEEEREISLTSPAAHQALACELSAQVNILNTTFSWKETDRAAAKRATHVLAEFAKNEEVVNVIVDGGAVAALVKHLQAPPPSLDGDNNQKPFEHEVEKGSAFVLGLLAVKPEHQQLIVDAGALSHLVDLLKRHRDGYNSRAVNSVIRSAADAITSLAHENSSIKTRVRKEGGIPPLVELLEFIDTKVQRAAAGALRTLAFKNDENKNQIVECNALPTLILMLRSEDAAIHYEAVGVIGNLVHSSPNIKKEVLIAGALQPVIGLLSSCCSESQREAALLLGQFAATDSDCKVHIVQRGAVRPLIEMLQSPDVQLREMSAFALGRLAQDTHNQAGIAHNGGLLPLLKLLDSKNGSLQHNAAFALYGLAENEDNVSDCIKVGGVQKLQDGEFIVQATKDCVAKTLKRLEEKIHGRVLNHLLYLMRVAEKVVQRRVALALAHVCSPDDQRTIFIDNNGLELLLGLLTSASPKQQQDGSVALYKLANKASSLSPMDAAPPSPTPQVYLGEQYVNKATLSDVTFLVEGCKRFYAHRIALLASSDAFRAMFDGGYREKDVRDIEIPNIRWEVFELMMRFIYTGSVDVTLDIAQDLLRAADQYLLEGLKRLCEYAIAQDISLDNVSNMYELSEAFHAISLRHTCILFILEQFDKLSTKPWHSSLIQRVIPEIRNYFSGALTKPNQRNFRL* 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g01047 708 Gene3D Potassium Channel Kv1.1; Chain A 519 667 IPR011333 -
Eupl07g01047 708 SUPERFAMILY ARM repeat 435 511 IPR016024 -
Eupl07g01047 708 SMART BTB_4 540 638 IPR000210 GO:0005515
Eupl07g01047 708 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 323 365 IPR000225 GO:0005515
Eupl07g01047 708 MobiDBLite consensus disorder prediction 1 29 - -
Eupl07g01047 708 ProSiteProfiles BTB domain profile. 540 608 IPR000210 GO:0005515
Eupl07g01047 708 Pfam Armadillo/beta-catenin-like repeat 312 351 IPR000225 GO:0005515
Eupl07g01047 708 Pfam Armadillo/beta-catenin-like repeat 192 225 IPR000225 GO:0005515
Eupl07g01047 708 Pfam Armadillo/beta-catenin-like repeat 228 267 IPR000225 GO:0005515
Eupl07g01047 708 SMART arm_5 82 135 IPR000225 GO:0005515
Eupl07g01047 708 SMART arm_5 353 393 IPR000225 GO:0005515
Eupl07g01047 708 SMART arm_5 228 268 IPR000225 GO:0005515
Eupl07g01047 708 SMART arm_5 312 352 IPR000225 GO:0005515
Eupl07g01047 708 SMART arm_5 186 226 IPR000225 GO:0005515
Eupl07g01047 708 SMART arm_5 270 310 IPR000225 GO:0005515
Eupl07g01047 708 SMART arm_5 136 184 IPR000225 GO:0005515
Eupl07g01047 708 SMART arm_5 468 508 IPR000225 GO:0005515
Eupl07g01047 708 PANTHER ARM REPEAT PROTEIN INTERACTING WITH ABF2 1 703 IPR044282 -
Eupl07g01047 708 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 239 281 IPR000225 GO:0005515
Eupl07g01047 708 SUPERFAMILY ARM repeat 70 410 IPR016024 -
Eupl07g01047 708 Gene3D - 35 208 IPR011989 -
Eupl07g01047 708 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 147 197 IPR000225 GO:0005515
Eupl07g01047 708 Gene3D - 210 517 IPR011989 -
Eupl07g01047 708 SUPERFAMILY POZ domain 532 635 IPR011333 -
Eupl07g01047 708 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 364 406 IPR000225 GO:0005515
Eupl07g01047 708 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 197 232 IPR000225 GO:0005515
Eupl07g01047 708 CDD BTB_POZ_ARIA_plant 527 643 - -
Eupl07g01047 708 Pfam BTB/POZ domain 533 636 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g01047 Eupl-Chr7 29955011 29964703 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g01047 186 392 U-box Gene Family AT5G67340 30.000 5.97e-13 70.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Eupl07g01047 BTB 2.8e-25 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g01047 - - nnu:104596487 1214.52