Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g01046 ATGGCATGTTCTCAAAAATTTCTTATATCCATGACAAAGTTGTTCTTTATCGCTCTTGTCGCTTCGATATCAACTTCATCGTCTCTCTGTGGGAATTTCTCCGACTGTCGATCTCTTCTCCAATTCAAAGATGGTATAACAAGTGATCCAGATGGTCATCTCCGAGGTTGGAATGAGACCACTTTCTTCTGCAACTGGACTGGAATTAAATGCCACCCATTTCTTAAAAACCGGGTTGTTGCTCTTGAGCTCATAAACATGGGCTTAGAAGGAAGTATCTCGCCGTTTCTAGCCAATCTTTCTCTCCTCACCACGCTTAATTTGCAAGACAACAGCTTTTATGGGGAGATTCCAACATCTACTGGAGAGCTTTCTGAATTGGCCCATGTGAATATGAGCGGCAACAAGCTCCAAGGCAGCATTCCAGCAGCACTACAAGGTTGCCGGAATTTGAAAATAGTAGACCTGACTTATAACAATCTTTCAGGAAGCATTCCAGATGAACTTGGCTGGCTAAGGAACTTGACATACTTGGCGCTCTCCGTCAACAACCTGACTGGCCTCATACCTCAATCTCTAACCAACCTGACAAAACTGACAGATCTTGAATTGGCTGTTAATTACTTCACTGGGAAGATTCCTCCAGAGCTCGGAGCACTGACAGAGTTAGAGATCATGTACTTCCACACCAATTACTTCGAAGGAACAATACCTGCGTCGATCGGAAATTGTACTGCTTTACGTGAAATTACGCTGAGTGAGAATTTGTTGACTGGTGAAATCCCTCTAGAATTGGGGGCTGGACTCCATAATTTACAAAAGCTGTACTTGCTGAAAAACCAATTTTCTGGGCAGATTCCAGTGACCCTTTCGAATCTTTCTCAGCTGACATTGCTCGACCTCAGCCTCAACAATTTAGAGGGGGAGGTTCCTTTAGAATTGGGGCAGTTACATAAACTCGAAATCCTCTACCTTCATAGCAATTACCTGGTTAGCGGCTTCGATAACTCTTCCCTGAGGTTTGTAACAGCTCTAACAAACTGCTCCTTGCTACAGAAACTGCACTTGGGTTCTAACTTTTTTGCAGGAAGCCTACCAATTTCTGTTAATGAGCTTTCCAAAGATCTCTATTACTTCAATCTCCTTGATAATCGGATAACAGGAGAGATACCTGAAGGTATTGGAAATCTAAGCAGCCTTGTGCACCTAACACTATTACACAACTACTTGAGCGGAACGATTCCTGCATCAATTGGAAAGCTGGGGCAGTTGCAGAGATTGGACTTGGGACAGAACAAAATCCTAGGGCCAATCCCAGACGATATGGGGCAGATGGCTAACCTCGGTTTACTGGGTCTAAATAAAAATTTGATTAACGGGTCAATCCCATCGTCACTGGGTAACCTTTCGCAGTTGAGGTATCTTGACTTGTCTCATAACCACCTTTCAGGAACGATTCCCACAGAACTCAGCCGTTGTTCTCTACTGATTTTGCTTGATTTATCATTTAACGAATTACAAGGGTCTCTTCCTACAGAAATAGGTCTATTCTCAAATTTGGCTCTTTTGCTCAACCTTTCAAACAACCATCTCCAAGGAGAGATACCGGCAAGCATTGGCAATTTGGCAAATGTCCAGGCAATTGACATGTCAGAAAATCAGTTTTCCGGTGCGATCCCGAGCTTGATCGGGAGCTGCATTGCGTTAGAGTATCTGAATCTCTCTAACAACATGCTTGAAGGTTCAATGCCAGATTCCTTGAGACAGATTAAGTATCTAAGAGTTCTGGACTTGGCTTTAAATAACTTAACAGGTAAAGTTCCAGCCTGGCTATGCAAAATGCAGATGCTCAACAATCTTAATTTGTCATATAACAGATTAACAGGAGAAGTTCCAAGGATGGAATGCTTCAACAATTATGGAAGAAGCTCATTTATGGGGAATGCTGGTTTGTGTGGTGGCCCTGCATCAATGGATCTCTCTCATTGTGACTTACAGGAGAAGGATAAGAAGCGAAAGATAGGGAAATGGGTTTATTTACTGCTCACAATTGCAGTAAGTTGCGCCATCTTGATCTGTATGATAGTTGTTTTTGTTTACCGCCACTTCTCCAAGAAGGATAATGAAGAGTCTGAGGCAGCACTTTTAATGGTTTTCCCTAGCAAAAGACATAAAAGCCTGACTCTAACTCAAAGGGAACTAGAAATTGCAACAAATGGATTCCACGAGGCCAATCTCTTGGGGAGGGGAAGCTTTGGGTCAGTCTACAAAGCAACCATTAACAGTGGGAAAACTGTGGTGGCAGTTAAAGTTCTGCACCAGGAGTGCAGTCAGGGTTATAAGAGTTTCAAGAGGGAATGCCGAATATTATCTGGAATTAAGCACCGAAACCTGGTCAGAATACTTGGAGCAACCTGGAATGCACATTTTAAAGCTCTTGTGTTGCAGTATGTAGGCAATGAGAACTTGGAACGGCATCTCTATCCTAATGGTTCAGAAGCGGGAGAAAGATGTCAACTGACAATGAGAGAAAGAATGGGAATAGCAATTGGTGTAGCCCGAGGATTGGAATATCTACATGAGGGGTGTCCACTCATTGCAGCAGACAAATCCAATGGAGATATTACCACCACCATGAATTTTCTTCGAGGATCAGTTGGGTATATTCCCCCAGAGTATGGACAGAGTTCTGAGGTATCAGAGAGAGGAGATGTGTACAGTTTTGGAGTCATGATGTTGGAGATGATGACAAGGAAGAGACCCACAAGTGAAATGTTCTCAGATGGGCTTGATCTGAGGAAATGGGTGCGTTCTGCATTTCCTAACCATGTTTTGGATGTTGTGGACATCTCACTAATGGAGGCAGATGTGGGAGGTGACTGTGGTGCTGAAAAAACACTCGAGCAATGTTGCATCCATATGGTTGATGTAGGGTTGATGTGCACAGAGGAGAATCCACAAAGACGTCCCAAAATATCTCTAGTCGCGCACAAACTAGAGAAGGTTTGGAGAGAAATGGAAGTCAAAATGGTGACCAGCTCATCAGCTTAA 3051 0.4323 MACSQKFLISMTKLFFIALVASISTSSSLCGNFSDCRSLLQFKDGITSDPDGHLRGWNETTFFCNWTGIKCHPFLKNRVVALELINMGLEGSISPFLANLSLLTTLNLQDNSFYGEIPTSTGELSELAHVNMSGNKLQGSIPAALQGCRNLKIVDLTYNNLSGSIPDELGWLRNLTYLALSVNNLTGLIPQSLTNLTKLTDLELAVNYFTGKIPPELGALTELEIMYFHTNYFEGTIPASIGNCTALREITLSENLLTGEIPLELGAGLHNLQKLYLLKNQFSGQIPVTLSNLSQLTLLDLSLNNLEGEVPLELGQLHKLEILYLHSNYLVSGFDNSSLRFVTALTNCSLLQKLHLGSNFFAGSLPISVNELSKDLYYFNLLDNRITGEIPEGIGNLSSLVHLTLLHNYLSGTIPASIGKLGQLQRLDLGQNKILGPIPDDMGQMANLGLLGLNKNLINGSIPSSLGNLSQLRYLDLSHNHLSGTIPTELSRCSLLILLDLSFNELQGSLPTEIGLFSNLALLLNLSNNHLQGEIPASIGNLANVQAIDMSENQFSGAIPSLIGSCIALEYLNLSNNMLEGSMPDSLRQIKYLRVLDLALNNLTGKVPAWLCKMQMLNNLNLSYNRLTGEVPRMECFNNYGRSSFMGNAGLCGGPASMDLSHCDLQEKDKKRKIGKWVYLLLTIAVSCAILICMIVVFVYRHFSKKDNEESEAALLMVFPSKRHKSLTLTQRELEIATNGFHEANLLGRGSFGSVYKATINSGKTVVAVKVLHQECSQGYKSFKRECRILSGIKHRNLVRILGATWNAHFKALVLQYVGNENLERHLYPNGSEAGERCQLTMRERMGIAIGVARGLEYLHEGCPLIAADKSNGDITTTMNFLRGSVGYIPPEYGQSSEVSERGDVYSFGVMMLEMMTRKRPTSEMFSDGLDLRKWVRSAFPNHVLDVVDISLMEADVGGDCGAEKTLEQCCIHMVDVGLMCTEENPQRRPKISLVAHKLEKVWREMEVKMVTSSSA* 1017
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g01046 1016 SUPERFAMILY L domain-like 34 335 - -
Eupl07g01046 1016 Pfam Leucine Rich Repeat 471 492 IPR001611 GO:0005515
Eupl07g01046 1016 Gene3D Transferase(Phosphotransferase) domain 1 723 867 - -
Eupl07g01046 1016 Pfam Leucine rich repeat 103 161 IPR001611 GO:0005515
Eupl07g01046 1016 Pfam Leucine rich repeat 569 627 IPR001611 GO:0005515
Eupl07g01046 1016 SMART LRR_typ_2 172 195 IPR003591 -
Eupl07g01046 1016 SMART LRR_typ_2 421 445 IPR003591 -
Eupl07g01046 1016 SMART LRR_typ_2 469 493 IPR003591 -
Eupl07g01046 1016 SMART LRR_typ_2 293 317 IPR003591 -
Eupl07g01046 1016 SMART LRR_typ_2 566 589 IPR003591 -
Eupl07g01046 1016 SMART LRR_typ_2 100 124 IPR003591 -
Eupl07g01046 1016 ProSiteProfiles Leucine-rich repeat profile. 471 493 IPR001611 GO:0005515
Eupl07g01046 1016 Pfam Leucine rich repeat N-terminal domain 35 71 IPR013210 -
Eupl07g01046 1016 FunFam Leucine-rich repeat receptor-like protein kinase TDR 345 665 - -
Eupl07g01046 1016 SUPERFAMILY L domain-like 344 434 - -
Eupl07g01046 1016 SUPERFAMILY Protein kinase-like (PK-like) 725 1005 IPR011009 -
Eupl07g01046 1016 Gene3D Ribonuclease Inhibitor 34 150 IPR032675 -
Eupl07g01046 1016 Gene3D Ribonuclease Inhibitor 266 336 IPR032675 -
Eupl07g01046 1016 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 418 864 - -
Eupl07g01046 1016 FunFam LRR receptor-like serine/threonine-protein kinase EFR 32 318 - -
Eupl07g01046 1016 Pfam Protein tyrosine and serine/threonine kinase 877 998 IPR001245 GO:0004672|GO:0006468
Eupl07g01046 1016 Pfam Protein tyrosine and serine/threonine kinase 745 861 IPR001245 GO:0004672|GO:0006468
Eupl07g01046 1016 PRINTS Leucine-rich repeat signature 469 482 - -
Eupl07g01046 1016 PRINTS Leucine-rich repeat signature 296 309 - -
Eupl07g01046 1016 SUPERFAMILY L domain-like 403 655 - -
Eupl07g01046 1016 Gene3D Transferase(Phosphotransferase) domain 1 868 1003 - -
Eupl07g01046 1016 ProSitePatterns Protein kinases ATP-binding region signature. 747 770 IPR017441 GO:0005524
Eupl07g01046 1016 Gene3D Ribonuclease Inhibitor 337 664 IPR032675 -
Eupl07g01046 1016 ProSiteProfiles Protein kinase domain profile. 741 1000 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl07g01046 1016 Gene3D Ribonuclease Inhibitor 154 265 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g01046 Eupl-Chr7 29944059 29949544 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g01046 34 999 Receptor kinase-like Gene Family AT3G47570 37.202 0.0 555
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Eupl07g01046 PK_Tyr_Ser-Thr 5e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g01046 - - vvi:100240751 1253.04