Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g01040 ATGCTGTCGAACCATATTCAGAACGGTATCGAGACGGCGAGGCTCGTCTGGTCTCGATTGCCGAATTCGGAGGAAGGTGAATTAGAGGAATTAAACGTCGCGAGAAGGAGTGACGGCAGTAGCGCCGAGAGTCTTGATTACGAGGTCATCGAGAATTACGCGTACAGGGAAGAACAGGCGCAGAGAGGAAAGCTTTACGTTGGATATTATGTAGCGGTGAAATGGTTATTTGCACTACTGATCGGTATTGGCACTGGATTAGCTGCCGTTTTTATTAATCTTGCTGTTGAGAACTTCGCTGGCTGGAAGTTTGCAGCAACTTTTTCTATAATACAAAAGTCGTACTTAGCGGGATTCATCGTGTACATATTGATCAACTTGGCTTTGGTCTTTTCTTCTGTATGTATCGTCACACAATTTGCACCAGCAGCAGCAGGATCTGGTATTCCTGAAATTAAGGGTTATTTGAATGGAGTTGATACACATGGTATCCTTCTTTTCAGAACCTTGATTGGAAAGATATTTGGGAGCATTGGTTCAGTGGGAGGTGGGCTTGCCTTAGGCAAAGAAGGCCCACTTGTTCATACGGGTGCATGTATCGCTTCTCTGCTTGGACAAGGTGGATCGACAAAATATCACCTAAGCTCAAGATGGTTACAAGTATTTAAGAGCGATCGTGATCGTCGGGATCTTGTAACATGTGGGTGTGCAGCTGGAGTTGCTGCTGCTTTTAGAGCTCCAGTTGGTGGTGTATTATTTGCACTTGAAGAGGTTACATCTTGGTGGAGAAGTCAACTTATGTGGCGTGTCTTTTTCACATCTGCTGTTGTGGCTGTTGTGGTGCGTACTGCAATGGGCTGGTGTAAGAGTGGAAATTGTGGACATTTTGGCTCAGGTGGCTTCATAATCTGGGACATATCGGGTGGTCAAGAAGACTACTCGTTCGAGGAATTATTGCCCATGGCTATAATTGGGGTTATTGGAGGTCTTCTTGGAGCGTTATTTAATCAGCTTACTCTTTATATAACTTATTGGCGTCGAAAATATCTACATAAGAAGGGGAATAGGGTCAAGATTATTGAAGTATGCGTTGTTTCTTTAGTAACCTCAATTATTTCCTTTGGGCTACCAATTCTAAGAAAATGTAGTCCATGCCCAGACTCAGAAGCTAATTCTGGTATAGAATGCCCTCGTCCACCAGGAATGTATGGAAATTACGTAAATTTTTACTGTTCTAAGGACAAGGAATACAATGATCTGGCAACTATTTTTTTCAACACACAGGACGATGCCATACGGAATTTATTTAGTGCAAACACATTTCATGAGTACAGTGCCCAAAGCCTTCTAACCTTTTTGGTTATGTTTTATACTTTGGCAGTGGTGACATTTGGTACTGCTGTTCCAGCTGGACAATTTGTTCCTGGAATAATGATAGGATCCACATATGGACGGCTTGTTGGCATGTTTGTGGTTACCTTTTACAAGAAGCTCAACATCGACGAGGGAACGTATGCTCTCCTTGGTGCTGCTTCTTTTCTTGGAGGTTCAATGCGGATGACAGTGTCACTTTGTGTCATTATGGTTGAAATCACAAATAACTTGAAACTCTTACCTCTTATCATGCTTGTTCTTCTTATATCAAAGGCTGTTGGTGATGCTTTCAATGAAGGTTTGTATGAAGAGCAGGCCCGCTTGAGGAGCATCCCATTACTTGAGTCAAGACCTAAAAACCACATGCGGAAAATGACAGCGAAGGAGGCGTGCAGGAATCAAAAGGTTGTCTCCTTCTCTCGTGTTGTTAAAGTTGCGGATGTAGTTTCTATTTTGCGAAGCAACGCGCACAATGGCTTTCCTGTGGTAGATCACGCACAGAATGGAGAGGCACTTGTAATTGGACTCATCCTTCGTAGTCACTTGTTGGTACTCCTGCAGTCTAAGATAGATTTCCAGCATGGCCATTTGCCTTGTGATATAAGAGGTGGATCCATACCGATCAGGCACAACTTCAGTGAATTTGTGAAACCTGTTTCAAGTAAAGGACTGTCCATAGAGGACATTCATCTAAGTCCAGATGACTTGGAAATGTACATAGATCTTGCCCCTTTTTTGAACCCCTCCCCATACATTGTCCCAGAAGATATGTCTTTGACGAAGGTGTACAATCTTTTTCGTCAGCTTGGATTGAGGCATGTATTTGTCGTCCCTCGCCCTTCTCGTGTTATTGGTTTGATTACGAGGAAGGATTTGTTAGTTGAGGAAAATGAAGATACGGCTACTGTGGAGCTACAATCGACTAGTGTAAGAGGTCGCCAGCCTGATAAAAGATTAGTTGCAAGGAATGCAGATGTGGAGCAGCCACTTCTCGACGGTCTTTTGGTGCAAGATTAG 2391 0.4333 MLSNHIQNGIETARLVWSRLPNSEEGELEELNVARRSDGSSAESLDYEVIENYAYREEQAQRGKLYVGYYVAVKWLFALLIGIGTGLAAVFINLAVENFAGWKFAATFSIIQKSYLAGFIVYILINLALVFSSVCIVTQFAPAAAGSGIPEIKGYLNGVDTHGILLFRTLIGKIFGSIGSVGGGLALGKEGPLVHTGACIASLLGQGGSTKYHLSSRWLQVFKSDRDRRDLVTCGCAAGVAAAFRAPVGGVLFALEEVTSWWRSQLMWRVFFTSAVVAVVVRTAMGWCKSGNCGHFGSGGFIIWDISGGQEDYSFEELLPMAIIGVIGGLLGALFNQLTLYITYWRRKYLHKKGNRVKIIEVCVVSLVTSIISFGLPILRKCSPCPDSEANSGIECPRPPGMYGNYVNFYCSKDKEYNDLATIFFNTQDDAIRNLFSANTFHEYSAQSLLTFLVMFYTLAVVTFGTAVPAGQFVPGIMIGSTYGRLVGMFVVTFYKKLNIDEGTYALLGAASFLGGSMRMTVSLCVIMVEITNNLKLLPLIMLVLLISKAVGDAFNEGLYEEQARLRSIPLLESRPKNHMRKMTAKEACRNQKVVSFSRVVKVADVVSILRSNAHNGFPVVDHAQNGEALVIGLILRSHLLVLLQSKIDFQHGHLPCDIRGGSIPIRHNFSEFVKPVSSKGLSIEDIHLSPDDLEMYIDLAPFLNPSPYIVPEDMSLTKVYNLFRQLGLRHVFVVPRPSRVIGLITRKDLLVEENEDTATVELQSTSVRGRQPDKRLVARNADVEQPLLDGLLVQD* 797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g01040 796 FunFam Chloride channel protein 662 753 - -
Eupl07g01040 796 ProSiteProfiles CBS domain profile. 704 760 IPR000644 -
Eupl07g01040 796 ProSiteProfiles CBS domain profile. 590 650 IPR000644 -
Eupl07g01040 796 CDD CBS_pair_voltage-gated_CLC_euk_bac 591 751 - -
Eupl07g01040 796 Gene3D - 576 757 IPR046342 -
Eupl07g01040 796 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 31 756 - -
Eupl07g01040 796 Gene3D Clc chloride channel 67 573 - -
Eupl07g01040 796 CDD ClC_6_like 43 572 - -
Eupl07g01040 796 FunFam Chloride channel ClC3 66 383 - -
Eupl07g01040 796 PRINTS Plant CLC chloride channel signature 272 282 IPR002251 GO:0005247|GO:0006821|GO:0016020
Eupl07g01040 796 PRINTS Plant CLC chloride channel signature 290 297 IPR002251 GO:0005247|GO:0006821|GO:0016020
Eupl07g01040 796 PRINTS Plant CLC chloride channel signature 420 436 IPR002251 GO:0005247|GO:0006821|GO:0016020
Eupl07g01040 796 PRINTS Plant CLC chloride channel signature 258 266 IPR002251 GO:0005247|GO:0006821|GO:0016020
Eupl07g01040 796 PRINTS Plant CLC chloride channel signature 48 56 IPR002251 GO:0005247|GO:0006821|GO:0016020
Eupl07g01040 796 Pfam Voltage gated chloride channel 130 552 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Eupl07g01040 796 Pfam CBS domain 705 751 IPR000644 -
Eupl07g01040 796 Pfam CBS domain 594 644 IPR000644 -
Eupl07g01040 796 SUPERFAMILY CBS-domain pair 577 751 IPR046342 -
Eupl07g01040 796 SMART cbs_1 593 645 IPR000644 -
Eupl07g01040 796 SMART cbs_1 707 755 IPR000644 -
Eupl07g01040 796 PRINTS Chloride channel signature 468 488 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Eupl07g01040 796 PRINTS Chloride channel signature 173 192 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Eupl07g01040 796 PRINTS Chloride channel signature 559 573 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Eupl07g01040 796 PRINTS Chloride channel signature 503 519 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Eupl07g01040 796 PRINTS Chloride channel signature 142 159 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Eupl07g01040 796 PRINTS Chloride channel signature 521 540 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Eupl07g01040 796 PRINTS Chloride channel signature 237 256 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Eupl07g01040 796 SUPERFAMILY Clc chloride channel 52 574 IPR014743 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g01040 Eupl-Chr7 29818480 29838313 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g01040 1 772 Ion Channels AT5G26240 83.226 0.0 1252
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g01040 K05016 - psom:113357398 1379.39