Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g00993 ATGGGTAGCTTAGAGGTCTTCTCCTCCTTTTTCTTTCTCTTCCTCCTCTTCCCAGACATGAGAGCAAGCCAAGACGACTGCTCAGGTGTAAGTTGCTCACCTTCCCGGTGCAACTCCTACGAGCCTGAAATTCGATTCCCGTTTCGAATAAAAGATAGACAGGCCGAGTGTTGTGGCTATCCAGGGTTCGACGTTACCTGCAACGAGAAGAATAAAACTGTTCTTCACCTGCCATCTTCATCAGAACTTACGGTAGGTCACATATATTACAGTAAACAGAAGCTAGAAATCTACGATCCAGATGGCTGCATTGTACGACGGCTTTATATGGGTCTCAACCTCTCTTCGTCTCCGTTCTATGTTAATGGTGGTCACAGCTGGATATTCATTAATTGTTCATCACGGGTAAACGATAGTTCGCTCCTCACACCCATCCACTGCCTCAATAACTCTACGTACCACGTTTACGTTGCCGCGCCTGCGTTTTCCAGTGAGGACTTGCCCAGTATATGCGGAATAGTTAAGATAGTTCAAGCTCCTCGGTCCCCTTATGATTACTTTTTCCTTCACTGGAATGTACCAGCATGCCAAGATTGCGAACAGAGACATGGGAATTGCAGAGTTGTGAATAAAACCAGTCTTGAAACTGAATGTTTCAATATTGTTAGCACCTTCAAGAATGGGGCATCGAGGCGACTAGTCGAAGGTGAAAACCCCATTATTAGTTGTAGACTCCACACTATCAGTAGGGAGTTCCTTCAGTCCTGCGTCGTCAGCTCAAATATCACATTTCTTTCTCTCTTCGTCTGTTCTTATACCTTTGTTCCTAAAATGGATTGCTCGATAAGCTCGACTTCATCTCGACCGACGATCATGGTGACCAACGACGACGGAATCGATGCACCTGGTATTCGAGCTCTGATTGAAGTTCTGGTATCCACCAATCGCTACGATGTTCATGTCTGCGCACCCGATTCGGAAAAGTCAGCTGTTAGTCATAGCATTACTTGGCGTCATGCTATTTCTGTCAACCCAGTTGAAATTGAAGGAGCAACAGCCTATGCAGTTTCTGGAACGCCGGCAGATTGTACATCTTTGGGGATCTCCAAAGAACTCTTTCCTACAATTCCTGATCTGGTACTCAGTGGCATCAACATGGGTAGCAACTGTGGATATCACATTGTTTACTCTGGGACGGTTGCCGGTGCTCGAGAGGCTTTCTTTTTTGGTGTACCTTCATTATCTATATCATACAATTGGGTTGGAGGTAAGAGCAGTACTCATGACTTTAAACTAGGCGCTGAGGCTTGCTTGCCCATCATAAATGCAGTACTGACTGAGATCAAGAATAATACATATCCTCATAGATGCTTTTTAAATATAGACCTCCCAACAAATGTTACAAATCATAAGGGGTACAAGGTGACTGAACAAGGTAAAGGTATTTTCAAAATGGGGTGGAAGCAAGTCACTTCTAACACACAAGGAGGAAAGATGTTATCAACAATGACTATGGAGACTGACTCGTTAGCAGGGGTAGAAACGAATGCATTCTCAACTTCATCACAAAAACATCGTTTATTCAAGAGAGAGGATCTCCTGGCATATAATAAGCTGACTGCTAGTGGGTGTTGA 1635 0.4422 MGSLEVFSSFFFLFLLFPDMRASQDDCSGVSCSPSRCNSYEPEIRFPFRIKDRQAECCGYPGFDVTCNEKNKTVLHLPSSSELTVGHIYYSKQKLEIYDPDGCIVRRLYMGLNLSSSPFYVNGGHSWIFINCSSRVNDSSLLTPIHCLNNSTYHVYVAAPAFSSEDLPSICGIVKIVQAPRSPYDYFFLHWNVPACQDCEQRHGNCRVVNKTSLETECFNIVSTFKNGASRRLVEGENPIISCRLHTISREFLQSCVVSSNITFLSLFVCSYTFVPKMDCSISSTSSRPTIMVTNDDGIDAPGIRALIEVLVSTNRYDVHVCAPDSEKSAVSHSITWRHAISVNPVEIEGATAYAVSGTPADCTSLGISKELFPTIPDLVLSGINMGSNCGYHIVYSGTVAGAREAFFFGVPSLSISYNWVGGKSSTHDFKLGAEACLPIINAVLTEIKNNTYPHRCFLNIDLPTNVTNHKGYKVTEQGKGIFKMGWKQVTSNTQGGKMLSTMTMETDSLAGVETNAFSTSSQKHRLFKREDLLAYNKLTASGC* 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g00993 544 Pfam Wall-associated receptor kinase galacturonan-binding 32 99 IPR025287 GO:0030247
Eupl07g00993 544 SUPERFAMILY SurE-like 290 493 IPR036523 GO:0016787
Eupl07g00993 544 Hamap 5'/3'-nucleotidase SurE [surE]. 289 542 IPR030048 GO:0008252
Eupl07g00993 544 Gene3D - 290 538 IPR036523 GO:0016787
Eupl07g00993 544 PANTHER 5'-NUCLEOTIDASE SURE 284 531 IPR030048 GO:0008252
Eupl07g00993 544 NCBIfam 5'/3'-nucleotidase SurE 290 481 IPR002828 GO:0016787
Eupl07g00993 544 Pfam Survival protein SurE 291 481 IPR002828 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g00993 Eupl-Chr7 29050609 29085445 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g00993 32 219 C3H Transcription Factor Family AT2G46495 32.673 2.12e-28 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g00993 K03787 - ming:122091824 393.275