Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g00984 ATGGGGATCACCATCTTCGAAACCTCCAAGAAGAGAAAACGTGATCAGAAGGTATACGGGTTCAATACCTTCGCTGATCCAGGAAGCCCCATTGATTTCTCCGGTCCGTTTCGCGACAATATCCGATTGTTCCTTCAAGAATGTGGAGAAATTGAAGAGTCCAACGTCCAAGGTATGCCAACCTGGTGCACTCTTCTCGTAAACCAGAACAATGGCGTCGTTGTTCCTCTCTACATCATCGAGGAGAGTGTGAAACACTGCTTACGCCCTTTCTGCGATCACTGCAGATGCATTGGATGGAGTCATCATTTTGTGTCGAAAAGAAGGTATCATGTAATAATTCCGGTGGATGATGAGTGGGATAAGCCGCCTAATGGACTTGTTTTGGATCATCATACCCATCTTTTGCATGGAATGATTCACTGTAATGGATTCGGGCATCTCCTCTGTATCAACGGGCTTGAAGGAGGAGCCAAGTATCTACGCGGAAGAGAGATCATGGATCTCTGGGATCGAATCTGCACAACTCTTCGAACCAGGAAAATTACAGTGGAGGACGTATCAAGGAAGAAATCGGTGGACCTTCGGCTTCTATACGGTGCCGCATACGGGCATCCCTGGTTCGGGAGATGGGGATACAAGTTCTTCCATGGAAGCTATGGAGTGACTGAGCACAAATACGAGACAGCAATTGAGATCCTCAGCTCACTCGGTCTCGACAAGATCATCGATGATTTTGCGAACACAGGCCGACACAGACATATCGAGAAAATTGTTCGAATTTACAGAGAAATGAGTGAAACCAAATTGATAACAATCAAAGATCTCCTCCAATTCATGCTCGCACTAAAATCCCAAACTTCTTCTGTTCAGAGGAAAATCATTCTGAAGCCAACCAGGCAACAAAAATCGCCAGTGAAGGACGAAAAACCCGGAAAATACCAAAAATTCGCATCTTTCACTGCGGACATGGCAAGCAGGTGGCCTGCAAGGCGATTAGAGTACGCAGCGGAGGTGATTGTTGACGCATTGAAAGAAAAGAAATTGAGAAGCAAGAATGGTCGTCGTGGAATGTCAAGGCAGGATGTCCGCGACGCAGCTAGGCTTCACATTGGCGACACAGGTTTACTCGACTTTGTACTTAAGTCTATCAATAACTTCATCGTCGGCAATTACATCGTCCGTCGCGCTATTAATCCGTCGACAAGAGTGTTAGAGTTTACAATTGATGAGATTGTGAACGCTGAATCAACTTTGGCTCCAGCTCCAGCTCCAGCTGACGGTCCAGGTCCGGGGATGGATGTTTGCAGTGATATGGAGTATTTGTATCAGGAAGTTTTGGAGGAATACCCAGAGTCAGGATTGGTGGGTTTGGCGTCTCGGGCGATTTTGGATAGCAAACACTTTGTAAAGGAGTGGCCGTTAAGGGACGAAGAGGATGCATTACTGAGGTTTATGTGCCGAGTGATGCCAAATTCGGACGAGTTAGAAACTGAGTTGACTCGACCATTGCCACCAGGTGAGCTTGTTGTGGTTCCAACACATTCGACGGTTGGCGAGCTGAAGACAGCAGTGGAGAGTGCTTTAAGGGATACGTACAGTGTAATGGAACGGTTTGTAGTGAGGGAGGTGGAAGGGATGGAAGAGATGGATGATGGGGAGGTGCTATTTGGCGCATTGGAGTCGGGTGCGCATGTTTGGGTGAGGGGGAGTGATGTAGATTTATGGAGCGAATTGAAATATGAAGGTGGGGCTGATAATTGGATGGTTGATTGTAGTTGTGGTGCAAGGGATGATGATGGGGAGAGGATGGTGGCATGTGACATCTGCGAGGTGTGGCAGCACACAAGATGTGGTGGCATTGACGATACCGAGTCTGTGCCGCCATTGTTCCTCTGCTCCAGGTGTGGCTCTTCACTTATGCCATCACGGACAGAGTTTCTGATGGACGCTGAGTATGCATGA 1965 0.4763 MGITIFETSKKRKRDQKVYGFNTFADPGSPIDFSGPFRDNIRLFLQECGEIEESNVQGMPTWCTLLVNQNNGVVVPLYIIEESVKHCLRPFCDHCRCIGWSHHFVSKRRYHVIIPVDDEWDKPPNGLVLDHHTHLLHGMIHCNGFGHLLCINGLEGGAKYLRGREIMDLWDRICTTLRTRKITVEDVSRKKSVDLRLLYGAAYGHPWFGRWGYKFFHGSYGVTEHKYETAIEILSSLGLDKIIDDFANTGRHRHIEKIVRIYREMSETKLITIKDLLQFMLALKSQTSSVQRKIILKPTRQQKSPVKDEKPGKYQKFASFTADMASRWPARRLEYAAEVIVDALKEKKLRSKNGRRGMSRQDVRDAARLHIGDTGLLDFVLKSINNFIVGNYIVRRAINPSTRVLEFTIDEIVNAESTLAPAPAPADGPGPGMDVCSDMEYLYQEVLEEYPESGLVGLASRAILDSKHFVKEWPLRDEEDALLRFMCRVMPNSDELETELTRPLPPGELVVVPTHSTVGELKTAVESALRDTYSVMERFVVREVEGMEEMDDGEVLFGALESGAHVWVRGSDVDLWSELKYEGGADNWMVDCSCGARDDDGERMVACDICEVWQHTRCGGIDDTESVPPLFLCSRCGSSLMPSRTEFLMDAEYA* 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g00984 654 SMART PHD_3 591 637 IPR001965 -
Eupl07g00984 654 Pfam PHD-finger 592 637 IPR019787 -
Eupl07g00984 654 PANTHER PHD FINGER PROTEIN MALE MEIOCYTE DEATH 1-RELATED 12 646 - -
Eupl07g00984 654 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 577 641 IPR013083 -
Eupl07g00984 654 SUPERFAMILY FYVE/PHD zinc finger 581 639 IPR011011 -
Eupl07g00984 654 ProSitePatterns Zinc finger PHD-type signature. 592 636 IPR019786 -
Eupl07g00984 654 CDD PHD_MMD1_like 591 636 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g00984 Eupl-Chr7 28866634 28869089 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g00984 10 642 PHD Transcription Factor Family AT5G22260 34.357 4.99e-127 389
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Eupl07g00984 PHD 3e-08 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g00984 K26271 - nnu:104612675 919.072