LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Eupl07g00941	ATGGATTTGAAGATCGGTGAGGAACATGGAAGCGTTGGGACATCCAAAAAGTTTGATGTCGGAGAGGGAGGCTTGGATTCGAAGGGAGTTGGAAGTATTAGTAACAAAGATGTGTTTTTCAGAGCGGATAGGATTGATTTGAAGAGCTTGGATGAGCAGCTAGAGAAGCACCTGAGCCGGGTCTGGTCGAGGCCCTTGAGGGACAAGGAGGCCCAAAGGCCAAAGGAGGAATGGGAGATCGATTTGTCTAAATTGGATATAAGGAATGTTATAGCTCATGGGACTTATGGTACCGTCTACCGTGGTGTTTATGATGGCCAAGATGTTGCAGTGAAGCTTTTGGATTGGGGAGAGGATGGTATTGCCACAACTGCTGAAACTGCTGCTCTTCGCGCATCATTTCAGCAAGAGGTTGCTGTTTGGCATAAGCTTGACCATCCAAATGTTACGAAGTTTGTTGGTGCTTCAATGGGAACTTCAAACCTGAAGATTCCTTCCAAAAATCCTTCAAGTGACGGTTATGATTCCCTTCCTTCAAGAGCATGTTGTGTTGTTGTGGAGTATCTTCCAGGTGGAACACTAAAGCAATTCTTAATAAGAAATAGGCGCAAGAAACTTGCCTTTAAGATTGTGATTCAACTTGCTTTAGACCTCTCTAGAGGTTTGAGCTATCTACATTCAAAGAAGATTGTACATCGTGATGTTAAAACTGAGAATATGTTGCTAGATGCTCATAGAACTCTAAAAATCGCCGATTTTGGTGTTGCTCGTGTTGAAGCTCAAAATCCAAAGGACATGACCGGTGAAACTGGTACCCTCGGGTACATGGCCCCAGAGGTCCTTGATGGTAAACCTTACAACAGAAGATGTGATGTGTATAGCTTTGGCATATGCTTATGGGAAATCTACTGTTGTGACATGCCATACCCTGATCTTAGCTTTGCTGAAGTCTCATCTGCTGTTGTTCGACAGAATTTACGACCAGAAATCCCTAGATGTTGCCCAAGTTCGTTAGCAAACATCATGCGAAAATGTTGGGATGCAAATGCAGAAAAACGCCCTGACATGGATGAGGTGGTGAGGTTGTTAGAGGCAATAGATACGAGTAAGGGAGGAGGCATGATACCTGATGATGAGGCTCACGGGTGCTTTTGTTTCAGTACGGCTCGTGGTCCATGA	1179	0.4444	MDLKIGEEHGSVGTSKKFDVGEGGLDSKGVGSISNKDVFFRADRIDLKSLDEQLEKHLSRVWSRPLRDKEAQRPKEEWEIDLSKLDIRNVIAHGTYGTVYRGVYDGQDVAVKLLDWGEDGIATTAETAALRASFQQEVAVWHKLDHPNVTKFVGASMGTSNLKIPSKNPSSDGYDSLPSRACCVVVEYLPGGTLKQFLIRNRRKKLAFKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDAHRTLKIADFGVARVEAQNPKDMTGETGTLGYMAPEVLDGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFAEVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPDMDEVVRLLEAIDTSKGGGMIPDDEAHGCFCFSTARGP*	393

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Eupl07g00941	392	SUPERFAMILY	Protein kinase-like (PK-like)	64	363	IPR011009	-
	Eupl07g00941	392	FunFam	Serine/threonine-protein kinase HT1	189	374	-	-
	Eupl07g00941	392	FunFam	Kinase suppressor of Ras 1	74	168	-	-
	Eupl07g00941	392	PRINTS	Tyrosine kinase catalytic domain signature	224	242	IPR001245	GO:0004672\|GO:0006468
	Eupl07g00941	392	PRINTS	Tyrosine kinase catalytic domain signature	290	312	IPR001245	GO:0004672\|GO:0006468
	Eupl07g00941	392	PRINTS	Tyrosine kinase catalytic domain signature	334	356	IPR001245	GO:0004672\|GO:0006468
	Eupl07g00941	392	PRINTS	Tyrosine kinase catalytic domain signature	186	199	IPR001245	GO:0004672\|GO:0006468
	Eupl07g00941	392	CDD	STKc_MAP3K-like	91	363	-	-
	Eupl07g00941	392	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	230	242	IPR008271	GO:0004672\|GO:0006468
	Eupl07g00941	392	ProSiteProfiles	Protein kinase domain profile.	85	366	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Eupl07g00941	392	Gene3D	Transferase(Phosphotransferase) domain 1	189	374	-	-
	Eupl07g00941	392	SMART	serkin_6	85	366	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Eupl07g00941	392	PANTHER	SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED	68	366	-	-
	Eupl07g00941	392	Pfam	Protein tyrosine and serine/threonine kinase	86	363	IPR001245	GO:0004672\|GO:0006468
	Eupl07g00941	392	Gene3D	Phosphorylase Kinase; domain 1	74	166	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Eupl07g00941	Eupl-Chr7	28209898	28228646	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Eupl07g00941	22	392	MAP Kinase Kinase Kinase	AT3G22750	78.763	0.0	625

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	TKL-Pl-4	Eupl07g00941		PK_Tyr_Ser-Thr	9.5e-60	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Eupl07g00941	-		-	jre:108989477	687.182