LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Eupl07g00939	ATGGATACACCGGAGAGGAACCAGATCGGGACTCCGATTTCTAAATTCGAGGATTCTCCCGTCTTTAACTATATCAACAGTCTTTCTCCTATTAAGCCAGTTAAGTCTATACACATTGCTCAGACCTTCAACTCGCTTAGTTTTGCATCTCTGCCATCCGTGTTTACTTCACCACATGTTAGTTCTCAGAAAGAATCCAGATTCTTGAGAAGGCATTACTTATCAGACTCTTCAAAACCTCAAGTTTCTTCTGACAATGGAAATGAAGGCAGAATGAGTTTGGGTGTTTTGGATGCCGTTCAGGTGTCTGATTACTCTGCTGATCCACAGGAAACTTTTGACCCAGGGAGTTCTATTAGAGAAGTTATTGTTGAGCCACCTAATGAGAACGCAAAGCTTGCTATTGAATTGCCACGGACCTTGAAGTATGATTGTGGTAGCCCCAACAGTAACCTTACTTCTTGCCAAGGTTTAAAGACAGATCCCATGCCAGAAATGTCTGGCACACCGGCAACACTTGTTCAATTTGCTCAAGAGGTCTCAGTTGAAAGGCGTCATTTGTTTGAAAGTGAAGTAGAGTTGCAGGGGATATGTCAGCTTGAGAAAACTAAAGAAGGAGCAGTATGTGATTGGGAGAATTTGATTTCTGAAGCTGCTGGCCTGTTAATTTTTGATTCATCCAATAATGCCGAGGCTTCTAAGGAGCAGGATCAGAAATTAGTGGATCCTGATACTAGTTCCTTTACATCTCTCGTGTTGAAACTCCCGCAAGATGGTACTGATGATTTACAGAACACCCAACCTGTTGTTCAGGTAGGTTTTTGTGAGCAACATGAAATGGAAGATCCTGCAACTCAATCAGGAGAAGTTGGGGAGCAGAAGGAAACAGATCACACGCCACATATACCTTCAAGTACTTTTCTGATTAAGCAAGGGGTTAACTTTCCAAGTGAGAAAATGGATGACAAAGCCGGAAATTATGCTCCATTTGGTTGCCAGCAGCAGCGTGGCATGCGAAGGCGTTGCCTAGTTTTTGAGATGACAGGAGTTCATAAAAAGAACTTGGAGGATGATTCTAATAGTAGTTCTTCAATCTCATCTCAATCTGATGGAAAATCTGTTTCTGATGATAAGCAATTGGTTCCTGTCAAGCCTGGAATGTCTTCTTCACCATGCGTGCTACCTGGTATTGGTTTGCACTTGAATGCTCTTGCAGTTACTACAAAGGACCCTAGAGTTGTCAAGCATGAGACACTGGCTTCTGGAAGGCAATTAATAAGCATGCCAACTTCTATTGCCTCTTTTCATTCTCTATCTGATAAAAAGCCTCTAAATAAATCCCTGGCTCTGAACTCTAAGGACAGAGACATGGGCCCATCTGGCAATGAAGTTCAGGTTATGCTGGATGCTTCTCGGGCATCTGTGTCTGGAGGTGGCGAAGAGCTCAGTGAGAGTAGCCCCAAGAAGAAGAGGCGCAGGTTGGAACATGCTGGAGAAAGTGAGGCCTGCAAGCGTTGTAACTGTAAAAAGTCGAAATGCTTGAAGCTTTACTGTGAATGCTTTGCTGCGGGTGTCTACTGCGTGGAGCCTTGCTCATGTCAGGAATGCTTTAACAAGCCTGTTCATGAAGATACTGTTCTGGCAACTCGCAAACAGATAGAATCTCGCAACCCACTTGCATTTGCCCCTAAAGTGATTAGGAGCTCCGAGTCTGTTCCAGAGACTGGGGAAGAATCTAACAAAACTCCAGCTTCAGCTCGGCATAAAAGAGGATGCAACTGCAAGAAATCAAGTTGCCTCAAGAAGTACTGTGAATGCTATCAGGGTGGCGTTGGATGCTCCATTAACTGCAGATGTGAAGGGTGTAAGAATGCATTTGGTAGGAAAGATGGATCTGCTCCAATTGGAACAGAAGAAGCTGAGCCAGAAGAGGAAGGAGCAGAAACCTGTGAAAATAATGATATGGATAAGAGTTTACAGAATAATGACGTCCAGAATGGTGAAGATCATTTTTTTGATCATGTTCTGCCTATAACGCCTCTCCAGATGTGCAGACCGTCGGTTCAGTTGCCGTTTTCCTCCAGTGGGAAGCCACCACGATCTTCTCTTCTCCCTGTTGGATCATCTCCTCAGTTGCATGCCAGCCAAACATCGGATTTTCTGCACTCTCAATCCAAGTTTGAGAAGCATCTCCAGATCATTCCGGAAGATGAAACCCCTGAAATTCTAAGAGGCAATTGCTCACCTATCAGCGGCGTGAAGATTGCTTCTCCAAATCGTAAGAGGGTCTCACCTCCTCACAATGACTTTGGTTTGTCTCCTGGTCGTCGGAGTAGCCGGAAGTTGGTACTGCAATCTATCCCCCCGTTCCCATCTCTCACTCACCACGAAACCAGTGATTTCCGGTGA	2409	0.4462	MDTPERNQIGTPISKFEDSPVFNYINSLSPIKPVKSIHIAQTFNSLSFASLPSVFTSPHVSSQKESRFLRRHYLSDSSKPQVSSDNGNEGRMSLGVLDAVQVSDYSADPQETFDPGSSIREVIVEPPNENAKLAIELPRTLKYDCGSPNSNLTSCQGLKTDPMPEMSGTPATLVQFAQEVSVERRHLFESEVELQGICQLEKTKEGAVCDWENLISEAAGLLIFDSSNNAEASKEQDQKLVDPDTSSFTSLVLKLPQDGTDDLQNTQPVVQVGFCEQHEMEDPATQSGEVGEQKETDHTPHIPSSTFLIKQGVNFPSEKMDDKAGNYAPFGCQQQRGMRRRCLVFEMTGVHKKNLEDDSNSSSSISSQSDGKSVSDDKQLVPVKPGMSSSPCVLPGIGLHLNALAVTTKDPRVVKHETLASGRQLISMPTSIASFHSLSDKKPLNKSLALNSKDRDMGPSGNEVQVMLDASRASVSGGGEELSESSPKKKRRRLEHAGESEACKRCNCKKSKCLKLYCECFAAGVYCVEPCSCQECFNKPVHEDTVLATRKQIESRNPLAFAPKVIRSSESVPETGEESNKTPASARHKRGCNCKKSSCLKKYCECYQGGVGCSINCRCEGCKNAFGRKDGSAPIGTEEAEPEEEGAETCENNDMDKSLQNNDVQNGEDHFFDHVLPITPLQMCRPSVQLPFSSSGKPPRSSLLPVGSSPQLHASQTSDFLHSQSKFEKHLQIIPEDETPEILRGNCSPISGVKIASPNRKRVSPPHNDFGLSPGRRSSRKLVLQSIPPFPSLTHHETSDFR*	803

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Eupl07g00939	802	MobiDBLite	consensus disorder prediction	354	387	-	-
	Eupl07g00939	802	MobiDBLite	consensus disorder prediction	566	586	-	-
	Eupl07g00939	802	MobiDBLite	consensus disorder prediction	473	494	-	-
	Eupl07g00939	802	Pfam	Tesmin/TSO1-like CXC domain, cysteine-rich domain	504	539	IPR005172	-
	Eupl07g00939	802	Pfam	Tesmin/TSO1-like CXC domain, cysteine-rich domain	590	625	IPR005172	-
	Eupl07g00939	802	SMART	CXC_2	501	542	IPR033467	-
	Eupl07g00939	802	SMART	CXC_2	587	628	IPR033467	-
	Eupl07g00939	802	MobiDBLite	consensus disorder prediction	359	375	-	-
	Eupl07g00939	802	MobiDBLite	consensus disorder prediction	689	721	-	-
	Eupl07g00939	802	MobiDBLite	consensus disorder prediction	753	802	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Eupl07g00939	Eupl-Chr7	28148342	28157384	Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Eupl07g00939	1	793	CPP Transcription Factor Family	AT3G22780	40.786	1.18e-144	440

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	CPP	Eupl07g00939		TCR	2.1e-11	No_clan

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Eupl07g00939	-		-	nnu:104596593	1102.43

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