Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g00935 ATGATGAGGAACCCATATCTCAATCTAGGCCTTTGGGGCCTTTTCTGTTTCTTCTTCTTTTCTAGACCCTCTCACCAATCTTCCCCACCTCTCCCAAACCCTAGACTTCTAAATGCCTACATAGCTCTCCAAGCATGGAAACATGTAATTACATCTGATCCCAAGAATTTCACTTCAAATTGGTGTGGCCCGAATGTTTGCGACTACAATGGTGTCTACTGTGCTCCAGCTCCTGATGATCCTCACATAACAACTGTTGCAGGTATCGACCTCAACCATGGCGAAATCTCCGGTTACTTGCCAGAAGACCTCGGACTTCTTACCGACCTTGCCCTTTTCCATATCAATTCCAACCGCTTCTGTGGAACCATCCCTGGAAGCTTCCGGAAGCTTCATCTATTATATGAGCTCGACATTAGTAATAACCGATTTACCGGTCATTTCCCTTCAGTAGTCCTCTGTCTCCCTTCACTCAAATATCTCGACATCCGATTCAACGAATTCCAAGGTGATGTTCCGGCCGAGCTCTTCGATTTGAAACTCGATGCGATCTTCATAAACAACAACAAGTTCCAATTCACCTTGCCGAAGAATATCGGCAACTCCACCGTTTCGGCGCTTGTTTTGGCAAATAACGGTATTAACGGTTGCTTCCCTCCAAGTTTGGGGAAAATGGCGGGAACGCTAAGAGAGATAATTCTGATGAATAATGGCCTTACCTCGTGTTTGCCACCAGAGATTGGGTTATTAAAGAACCTGACTGTTTTTGACGTCAGCTTCAATAAGTTGGTGGGACCGTTGCCTGAAACCATGGGAAACATGAAGAGCTTGGAGCAGTTGAACGTGGCACATAACCAACTTTCCGGCGAGATCCCGACAAGTATATGCTCATTGCCCAACTTGGAGAATTTCACGTACTCCTATAATTACTTCTGCAGTGAACCTCCGAGCTGTCTCAAGCTACCAGACAAGGATGATAGGAAGAATTGTATCCCGGGCCGACCGTTGCAGCGATCGGCAGAGGAATGCAAATCGTTCCTTTCACACCCTGTGAATTGCGACGCCTTTGGATGTTCTCCAAGAAGTCCTCCGCCACCTCCGCCACCTCCTCCACCACCACCACCACCACCACCACCTCCACCTCCACCTCCACCTCCACCTCCACCTCCACCGCCACCGCCGCCGCCGCCGCCGCCACCACCACCACCACCAGTTCATTACTACCATCCATGA 1233 0.4899 MMRNPYLNLGLWGLFCFFFFSRPSHQSSPPLPNPRLLNAYIALQAWKHVITSDPKNFTSNWCGPNVCDYNGVYCAPAPDDPHITTVAGIDLNHGEISGYLPEDLGLLTDLALFHINSNRFCGTIPGSFRKLHLLYELDISNNRFTGHFPSVVLCLPSLKYLDIRFNEFQGDVPAELFDLKLDAIFINNNKFQFTLPKNIGNSTVSALVLANNGINGCFPPSLGKMAGTLREIILMNNGLTSCLPPEIGLLKNLTVFDVSFNKLVGPLPETMGNMKSLEQLNVAHNQLSGEIPTSICSLPNLENFTYSYNYFCSEPPSCLKLPDKDDRKNCIPGRPLQRSAEECKSFLSHPVNCDAFGCSPRSPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPVHYYHP* 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g00935 410 Gene3D Ribonuclease Inhibitor 40 200 IPR032675 -
Eupl07g00935 410 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 224 315 - -
Eupl07g00935 410 MobiDBLite consensus disorder prediction 359 410 - -
Eupl07g00935 410 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 26 406 - -
Eupl07g00935 410 MobiDBLite consensus disorder prediction 357 410 - -
Eupl07g00935 410 Gene3D Ribonuclease Inhibitor 201 332 IPR032675 -
Eupl07g00935 410 Pfam Leucine rich repeat 111 167 IPR001611 GO:0005515
Eupl07g00935 410 Pfam Leucine rich repeat 228 287 IPR001611 GO:0005515
Eupl07g00935 410 SUPERFAMILY L domain-like 38 322 - -
Eupl07g00935 410 FunFam Leucine-rich repeat extensin-like protein 1 40 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g00935 Eupl-Chr7 28071485 28073090 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g00935 24 367 Leucine-rich Repeat extension Gene Families AT3G22800 69.565 2.09e-169 481
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g00935 - - vvi:100251086 585.874