Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g00932 ATGTTTAATGGAGTCCCTGAGCAGTACCACCAATTCATAGCTTCAAGAACAGCTCTCCCCCTCTCTCTCCCTCTCCCTCTCCCTCTCCCTCCCCATGTCTCCCCTCCCACCTTTTCCACCCTCGACCTCCATCCTTCTCATCATCAAGTCTTCCAATCACATCATCTTCTTCACCAATTGCACTTCCAATCTTCGATGCACCAAGATGAAGAGAAAGAAGAAGAGGGAGTAGTTCGAGGAAGCATAGAGCTCCAAGGAGTGGGAGATTTATCTGAACAGATGGATCTCTGGCCAAAAGAGGAAGTACTTGCACTGTTGAGAATCAGATCTAGCATAGGGAATAGCTACTCAGACTTTATTTGGGAGCATGTCTCAAGGTGGTCCTGGTTTTTGTGTTTTTATTGTGAAATCAGGAAACTTGCAGAGCTAGGATTCAAGAGGAGTGCGGATAAATGCAAGGACAAATTCGAAGAGGTGAGTAATTACTGCAACAACAGTACTAGTTATGGTACGAATTACAGGTCTTTTTGTGAGCTCAAAGCTCTCTTTGAAGATCAAAACTGCAAGTCCTTAGCTGAGAAGATGGTAAGAACCAATGAAGGAAGGAAGGTGAGTCTGAATTTGGAAGATAGTTCAGGAAATGAGACTTTAGAGAACCCAAATCCATATGTGGCGAAAAATCCAACAAGGAAGAAGAGGAAAAGGCACCATAAACTTGAATTGCTGAAGGGTTTCTGTGAACAGATTGTGACCAAGATCATGGCCCAACAAGAAGAGCTGCACAAGAAGCTTATAGAAGATGTGGAAAGAAGAGAGGAAGAAAGGGTTGCTAGAGAAGAAGCATGGAAGAAGAAAGAGATGGATAGGATTAACAAGGAAATTGAAAAAAGGGAACAAGAGCAAGCCATAGCATGTGATAGAGATGCTACAATCATCGAGTTCTTGAAGAAATTCACATCAAGCAGTCCATCTCAAAACCTAGGTCTTGTAATGAAAAATGAAGATCTCGAGTCACCCAATTACAATCCAAATCCAAACCCTAATTCTGTCTCTAGGGTTCCAACCCCAAACAGCCCAAATGTACCCACTTCAGCTACCATTGTCCTACAACCTGAAAGCCCAAGTTCCATTACTACTCAGACCAACCCAAATGCACCCACTTCATCTACTATAGTCCTTGCAACCCAAAATCTTAATTGTGGTAACACCCAAAACAATCCAAAGATACCCATTTCATCAACTACTCAAGACCTATCTTCCCAAAACCCTAGTTCCATAACTACCCAAAACCCTAATTCTACATTCAGTGATAGAGAAGACTCTGGTAAAAGATGGCCAAGAGATGAAGTTTACTCACTAATAAACCTTAGGTGCAATCTCTATAACAATGGTGAAGATAAGGAGAGCACAAAAGTACCATTATGGGAGAGGATTTCACAAGGAATGTTGGAATTGGGCTATAAAAGGAGTGCAAAGAAGTGTAAAGAGAAATGGGAGAACATAAACAAGTACTTCAGGAAAACCAAAGATGCAAACAAGAAGAGATCTCTAGACTCAAAAACTTGTCCTTATTTTCATCAATTGAGCAGTTTGTACACTCAAGGAACACTTATGTTGCCTTCTGAAGGACCTGAAATCCATTCAAGTTCGCCGGAAAACTGCTCGGCAATACCGGAAACCCGGTTAGAATCTTGTCCAGGTGGTTTTAGTAAAGCAGATGTGCAAGTGGATGAAAATGAGAGGAATATGGTTCAAGTATCCTCCTTAGAGTTTGAATATTAA 1782 0.4153 MFNGVPEQYHQFIASRTALPLSLPLPLPLPPHVSPPTFSTLDLHPSHHQVFQSHHLLHQLHFQSSMHQDEEKEEEGVVRGSIELQGVGDLSEQMDLWPKEEVLALLRIRSSIGNSYSDFIWEHVSRWSWFLCFYCEIRKLAELGFKRSADKCKDKFEEVSNYCNNSTSYGTNYRSFCELKALFEDQNCKSLAEKMVRTNEGRKVSLNLEDSSGNETLENPNPYVAKNPTRKKRKRHHKLELLKGFCEQIVTKIMAQQEELHKKLIEDVERREEERVAREEAWKKKEMDRINKEIEKREQEQAIACDRDATIIEFLKKFTSSSPSQNLGLVMKNEDLESPNYNPNPNPNSVSRVPTPNSPNVPTSATIVLQPESPSSITTQTNPNAPTSSTIVLATQNLNCGNTQNNPKIPISSTTQDLSSQNPSSITTQNPNSTFSDREDSGKRWPRDEVYSLINLRCNLYNNGEDKESTKVPLWERISQGMLELGYKRSAKKCKEKWENINKYFRKTKDANKKRSLDSKTCPYFHQLSSLYTQGTLMLPSEGPEIHSSSPENCSAIPETRLESCPGGFSKADVQVDENERNMVQVSSLEFEY* 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g00932 593 Coils Coil 254 274 - -
Eupl07g00932 593 MobiDBLite consensus disorder prediction 335 365 - -
Eupl07g00932 593 MobiDBLite consensus disorder prediction 399 436 - -
Eupl07g00932 593 FunFam Trihelix transcription factor GT-2 445 507 - -
Eupl07g00932 593 Pfam Myb/SANT-like DNA-binding domain 443 530 IPR044822 -
Eupl07g00932 593 CDD GT1 443 509 - -
Eupl07g00932 593 PANTHER FI21293P1 64 551 - -
Eupl07g00932 593 MobiDBLite consensus disorder prediction 399 444 - -
Eupl07g00932 593 ProSiteProfiles Myb-like domain profile. 437 502 IPR001005 -
Eupl07g00932 593 Gene3D - 445 507 - -
Eupl07g00932 593 Gene3D - 97 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g00932 Eupl-Chr7 28000181 28002844 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g00932 241 534 Trihelix Transcription Factor Family AT5G28300 45.875 4.19e-75 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Eupl07g00932 Myb_DNA-bind_4 2.7e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g00932 - - nnu:104598654 610.142