Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g00917 ATGAATCCTCCATCCAGAGTGAAAGAAGAGTTTCCGGGAGCTAGTTCGTCTTACTCTGGTTACCGGCAATCGATTCCTCCTCCCCGGCCAATGGAAGGCCTCCATGAAACTGGGCCTCCTCCTTTTCTCAACAAAACCTTTGACATGGTTGATGATCCAAGCACAGACCACATTGTTTCTTGGAGCAGAGCTAGCAACAGCTTTGTTGTGTGGGATCCCCAGACTTTCTCCATGAATCTTCTCCCTAGATACTTCAAGCACAACAACTTCTCCAGCTTTGTTAGACAGCTCAACACTTATGGCTTTAGAAAGGTGGATCCAGATAGATGGGAGTTTGCCAATGAAGGATTTCTTAGAGGGCAGAAACATCTTCTGAAGAACATCAGGAGGAAGGCTCCTTCTCAGCCACCCCTTCAACAGCAAGCTCTGGGTGCTTGTGTTGAAGTCGGGCGGTTTGGATTAGATGGAGAGATTGATCGATTGAGGCGTGACAAGCAAGTTCTTATGATAGAACTAGTGAAGCTCAGGCAACAACAGCAGGACACTCGTGCCCAACTTCAAGCTATGGATGAAAGGCTTCAAGGAACAGAACAGAAGCAACAACAGACGATGACTTTCTTGGCAAGAGCAATGCAGAACCCCACTTTTATCCAACAATTAGTCCAACAGAAAGAGAGACGAAAGGAACTTGAAGAAGCAATTACTAAGAAAAGAAGAAGACCGATCGATCAAGGGCCTAGTGATATTGGAAGTAGCGATTCGAGTCGAAGCCTTGAAAGCGAATATCCAATTAAAGCTGAACCCCAAGAATTTGGAAATGTTTACGGGTTTGAAGTTTCGGAGCTGGAGAGAGTTGCATTGGAGATGCAGGGATTGAGTAAAGCTGGAAAGGAGCTAGAGGAAGCACAGGTAGAGCAAGAACCTGAACTAGAAAGTGAAGATGAAGCACTAGATGAGGGATTTTGGGAAGAATTGTTGAATGAGAGGTTTGGAGAAGAAAAGGGTATACTGGACTTTGAAGGAAGAGAAGATGAAGACGTGAGTGTCTTGGCTGAACGATTGGGTTACTTGGGTTCCAGCCCAAACTAA 1089 0.4545 MNPPSRVKEEFPGASSSYSGYRQSIPPPRPMEGLHETGPPPFLNKTFDMVDDPSTDHIVSWSRASNSFVVWDPQTFSMNLLPRYFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEGFLRGQKHLLKNIRRKAPSQPPLQQQALGACVEVGRFGLDGEIDRLRRDKQVLMIELVKLRQQQQDTRAQLQAMDERLQGTEQKQQQTMTFLARAMQNPTFIQQLVQQKERRKELEEAITKKRRRPIDQGPSDIGSSDSSRSLESEYPIKAEPQEFGNVYGFEVSELERVALEMQGLSKAGKELEEAQVEQEPELESEDEALDEGFWEELLNERFGEEKGILDFEGREDEDVSVLAERLGYLGSSPN* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g00917 362 MobiDBLite consensus disorder prediction 1 37 - -
Eupl07g00917 362 Coils Coil 282 302 - -
Eupl07g00917 362 PRINTS Heat shock factor (HSF) domain signature 93 105 IPR000232 GO:0003700|GO:0006355|GO:0043565
Eupl07g00917 362 PRINTS Heat shock factor (HSF) domain signature 80 92 IPR000232 GO:0003700|GO:0006355|GO:0043565
Eupl07g00917 362 PRINTS Heat shock factor (HSF) domain signature 42 65 IPR000232 GO:0003700|GO:0006355|GO:0043565
Eupl07g00917 362 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 28 278 IPR027725 -
Eupl07g00917 362 FunFam Heat shock transcription factor 1 35 132 - -
Eupl07g00917 362 Coils Coil 158 199 - -
Eupl07g00917 362 Coils Coil 220 240 - -
Eupl07g00917 362 ProSitePatterns HSF-type DNA-binding domain signature. 81 105 IPR000232 GO:0003700|GO:0006355|GO:0043565
Eupl07g00917 362 SMART hsfneu3 38 131 IPR000232 GO:0003700|GO:0006355|GO:0043565
Eupl07g00917 362 MobiDBLite consensus disorder prediction 231 264 - -
Eupl07g00917 362 Gene3D - 34 132 IPR036388 -
Eupl07g00917 362 Pfam HSF-type DNA-binding 42 131 IPR000232 GO:0003700|GO:0006355|GO:0043565
Eupl07g00917 362 SUPERFAMILY "Winged helix" DNA-binding domain 38 131 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g00917 Eupl-Chr7 27762495 27765409 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g00917 24 362 HSF AT3G22830 55.041 2.83e-137 395
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Eupl07g00917 HSF_DNA-bind 3.2e-33 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g00917 K09419 - nnu:104613219 485.337