Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g00916 ATGAATCCTCCAGCCAGAGTGAAGGAAGAGTTTCAGGAAGCTAGTTCACCTAACTCCAGTAACCGGCAATTGAATCCTCTTCCCCAGCCAATGGAAGGCCTCCATGACACTGGGCCTCCTCCTTTTCTCACCAAAACCTTTGACATGGTTGATGACCCCAGCACAGACCATATTGTTTCTTGGAGCAGAGCAAACAACAGCTTTGTTGTGTGGGATCCCTACACTTTCTCTGTCAATCTTCTCCCCAGATGTTTTAAGCACAACAACTTCTCCAGCTTTGTTAGGCAGCTCAACACTTATGGATTTAGAAAGGTGGATCCAGATAGGTGGGAGTTTGCCAATGATGGATTTATTAGAGGGCATAAACATCTTTTGAAGAATATCAGGAGGAGGAAGGCTCCTTCTCAGCCTCCCCTTCAACCGCAAACTCTGGGACCTTGTGTTGAAGTCGGACGGTTTGGATTAGATGGACAGATTGATCGGCTGAGGCGTGACAAGCAAGTTCTAGTGATGGAAGTAGTGAAGCTCAGGCAACAGCAACTGGACACTCGTGCTCACCTTCAAGCTATGGAGGAAAAGCTTCATGAAACAGAGCAGAAACAGAAACAGATGATGACTTTCTTGGCAAGAGCAATACAGAACCCAACTTTTATCCAACAATTGGTCCAACAGAAAGAGAGAAGAAAGGAAATTGAAGAAGCAATTACTAAGAAAAGAAGAAAACAGATCAATCAAGGGCCTAGTGACGTTGAAAGTGAATATCCAATTAAAGTTGAAACCCAAGAATTTGGAAATCTTTACGGGTTTGGAGTATCGGAGCTGGATACACTTGCATTGGAGATCCAGGGATTGAATAAAGCTGGAAGAGAGCCAGAGGAAGTACAGGAAGAACAAGAACCCGAATTCGAAAGTGAAGATAAAGTACTAGATGAAGAGTTTTGGGATGAATTGTTGGATGAGAATTTTGATGAAGAAAAGGTTATACCGCCACCGGTCTTCTTCGAAGGAAAAGACGACGAAGACGTGAGTGCCTTGGCTGATCAATTGGGTTACTTGGGTTCCAGCTCAAAGTAA 1074 0.4404 MNPPARVKEEFQEASSPNSSNRQLNPLPQPMEGLHDTGPPPFLTKTFDMVDDPSTDHIVSWSRANNSFVVWDPYTFSVNLLPRCFKHNNFSSFVRQLNTYGFRKVDPDRWEFANDGFIRGHKHLLKNIRRRKAPSQPPLQPQTLGPCVEVGRFGLDGQIDRLRRDKQVLVMEVVKLRQQQLDTRAHLQAMEEKLHETEQKQKQMMTFLARAIQNPTFIQQLVQQKERRKEIEEAITKKRRKQINQGPSDVESEYPIKVETQEFGNLYGFGVSELDTLALEIQGLNKAGREPEEVQEEQEPEFESEDKVLDEEFWDELLDENFDEEKVIPPPVFFEGKDDEDVSALADQLGYLGSSSK* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g00916 357 SUPERFAMILY "Winged helix" DNA-binding domain 38 131 IPR036390 -
Eupl07g00916 357 PRINTS Heat shock factor (HSF) domain signature 42 65 IPR000232 GO:0003700|GO:0006355|GO:0043565
Eupl07g00916 357 PRINTS Heat shock factor (HSF) domain signature 93 105 IPR000232 GO:0003700|GO:0006355|GO:0043565
Eupl07g00916 357 PRINTS Heat shock factor (HSF) domain signature 80 92 IPR000232 GO:0003700|GO:0006355|GO:0043565
Eupl07g00916 357 MobiDBLite consensus disorder prediction 294 308 - -
Eupl07g00916 357 FunFam Heat shock transcription factor 1 35 132 - -
Eupl07g00916 357 Coils Coil 159 179 - -
Eupl07g00916 357 MobiDBLite consensus disorder prediction 12 27 - -
Eupl07g00916 357 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 28 251 IPR027725 -
Eupl07g00916 357 Pfam HSF-type DNA-binding 42 131 IPR000232 GO:0003700|GO:0006355|GO:0043565
Eupl07g00916 357 MobiDBLite consensus disorder prediction 1 38 - -
Eupl07g00916 357 ProSitePatterns HSF-type DNA-binding domain signature. 81 105 IPR000232 GO:0003700|GO:0006355|GO:0043565
Eupl07g00916 357 MobiDBLite consensus disorder prediction 287 308 - -
Eupl07g00916 357 SMART hsfneu3 38 131 IPR000232 GO:0003700|GO:0006355|GO:0043565
Eupl07g00916 357 Gene3D - 34 132 IPR036388 -
Eupl07g00916 357 Coils Coil 221 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g00916 Eupl-Chr7 27752845 27754327 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g00916 28 356 HSF AT3G22830 56.676 4.50e-135 389
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Eupl07g00916 HSF_DNA-bind 1.1e-31 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g00916 K09419 - nnu:104613219 480.715