Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g00902 ATGCAAGTTTCTGAACCTCTCGTCGATGGCGAGCAGTCGAATGAAGATGGAGAGGCGGATAAAACTTCTGAGGATGGATCAGAGGGACACATTCTGGACGAAGAGCCAGTTCATGACGTATCAGGGAAAACATGGGAGCTTTCTCTCTTGGATAGTTCGGAGGATTCGATTAAGGGGCTATACGTGTACAGGAACGTCTTCAATTTGATTCCTCGATCTGTTGGAGGATTTGGGAGCTTGAAGACTCTGAAGTTCTTTGCAAACGAGATAAATTTGTTTCCTTCGGAGACTGGGAATTTGGTTGAGCTGGAATGCTTGCAGGTGAAGATATCTTCGCCGGGGCTGTCAGGTCTGCCTTTGCAGAAGTTGAAAGCTTTGAAGGAGCTAGAGCTGTGTAAGGTGCCTCCACGGCCCTCGGCGTTTACAATATTGAGCGAGATCACCAACCTCAAGTGCTTGACGAAACTTTCTGTTTGTCACTTCACCATCAGATACCTTCCTCCAGAAATTGGTTGCCTTAATAAACTGGAGGATCTAGATCTTTCATTCAATAAGCTCAAGAGTTTGCCTAATGAGATTACTGCTTTGATTGCCCTGAAATCATTGAAAGTTGCTAATAATAAATTGGTGGAACTACCTTCGGGTTTGTCCTCTCTACAAAGGCTTGAAAGTTTGGACCTTTCAAATAATAGGTTGACATCACTGGGGTCTCTCAACCTTGCGCCTATGCAAACCCTTCAGAAATTAAATCTTCAGTACAATAAGCTTCTCAATTGTTGTCAAATTCCTTCATGGATATGCTGCAACTTGGAAGGAAATGGCAAAGGCACATCCAATGATGCATTCATCAGCTCTTTAGTCAAAGTGGATGTATTTGATGCGGTCGTTCAGAAGTTTGATGGTAGTCATTCTTGTAATGGTTCTCATGCTACCTCATTGAGCCTGTTGTCTGAGGCCTCATCGAGCAGTAGATGTTCTGCGGCACGGAGGATGAGAAAGGGGTGGAAGCGACGTGATTATTTGCAACAGAGAGCTCGTCAAGAGCGTTTGAACAGCATTAGGAAGTGGAGAGGTGATGATCACCACCAGATAGTGACTATGAAGGTTGATGCACAATGCAAAGCATGCAAGCTACCTGCTGTTGGCTCTGAATCTTTTTGTGAATCAAGTTCTCTTGCAGAGGGTGCATCAGACATTGTAAAAGATCTCGATGACAATGATGGACAGGCACTTGCTAGTGAAGATGATCCACAGAATTTGTGTAATCATTGTGAGGATGAAAAACTTATTTTTGATTCTGCTGGGATAAGTAAAGAGTGCGATGATGAATGTGGTGGAGAGCCTAAGCCATCTTCGGCCAGTTCCTTGGATAGGATTGATGAGCAGGATGAGGACTCATCTTCAGACGTATCTATAAATACTTTAAAGTCAAAAAGACACTCTGATAGGGATCTTGATAATCCCAAACCGAGCAAGTCACGGAGGCCAGTTGACAATCACTCAAGTTTATCACACAGATATAGCACTGAATCATTCTGCAGCATTAATGACCGTTTACCAGATGGCTTTTATGATGCGGGACGTGATCGACCTTTCATGCCACTGCAGAGTTATGAGCAGAGTCTTTGTCTTGACTCACGCGAAGTAATCCTTGTGGACAGAGAAAGGGACGAGGAATTGCATGTGATCATATTGTCTGCTCAGGCATTGGTGTCCCCTTTGAAGCAGCAAAGTAGTTTGGTTGAAGAAAGAAAACTGTTGGCTGTTGATAACTTGCAGAGAGCATCATTGCTTGCTCTATTTGTTTCGAATTGGTTTGGAGGCAGTGATAGAAGTAATCTTATTGCAAAGACACGAAAAGCAGTGGCTGGTTCAAATTATCAGAAGCCTTTTGTTTGTACTTGCCCAACTGGAAACAATGAGGATGGTAGAACATACTCCAAACAGATTTTGAGCACTGCAGAAAATTTTAACTTCAATGATCTATGTGAGAAGTCTCTGCGGATTATTAAGCAGGCAAACAATTCTAATGTTGTCCCAATCGGGACTCTGCGGTGGGGTGTGTGTAGACACAGAGCAGTGCTCATGAAGTATCTATGTGATCGGGTGGATCCTCCAATTCCTTGTGAGCTTGTGAGGGGCTATCTAGACTTCTTGCCACATGCCTGGAACACCATTCTTGTCAGGAGGGACAATTCATGGGTGCGCATGGTTGTTGATGCATGTTGTCCCACTGATATAAGAGAAGAGACAGATCCAGAGGTTTTTTGCAGATATGTTCCGTTGAGTCGGATTCATGTTCCTGTGACAGCTGAGAATATTGCGAGCCCAGGTTGCTCATTTCCTTCTCTATCATTATGTGATGAAATTGAAAAAGCAGCATCAAGTTCCCTCATCCGGTGCAAGTTTGGATCTGTTGAAGCAGTGGCAAAGGTCCGTACTTTAAAAATATATGGGGCTTCGGTTGAGGAAGCTAAGAATTTTGAGTATACTTGTTTAGGGGAAGTAAGAATATTAGGCACTTTGAAGAAACACTCCTGCATTGTAGAAATTTATGGGCATCAGATCTCTTCTAAGTGGGTTCCTCCAGTAGATGGAAATAAAGAGCATCGCTTGTTACAATCTGCAATTGTAATGGAGTACATAGAAGGAGGTTCTTTAAAGAATTATGTAGAGAAGCTATCAAAAAGTGGTGAGAAGCATGTCCAAGTGGAGTTGGCATTGTTCCTTGCTAGGGACGTTGCCTGTGCATTGGCGGAGTTGCACTCTAGGCACATTATTCATCGCGATGTAAAAAGTGAAAACATTTTGATTGATTTGGATAGCAAAAGAGTTGATGGCACTCCGATTGTCAAGCTTTGTGATTTTGACAGAGCAGTTCCTCTTCGATCTTTCTCACACACATGCTGTATTTCTCATCTTGGAATACCTCCACCTGATGTTTGTGTTGGGACGCCACGTTGGATGGCTCCCGAGGTGCTGCAGGCAATGCACAGACGGAACATTTATGGGCTGGAAGTGGATATTTGGTCGTATGGGTGCTTACTTCTGGAATTGCTTACGCTGCAAGTCCCTTATGCAGGCTTGTCAGACTCAGAAATCCACGACCTACTTCAGATGGGTCAGCGGCCAAGACTCACAGATGAACTGGAGACTTTGACATCTTCAAAGGAGCCTGCAATGGCTAGATCATGCACAGAAGCACAGGGAACTCGAGCCGAAGCAGAGACTTTGAGATTCCTGGTTGACTTGTTCCACCAGTGTACTCAGGGGAATCCCTCCGACCGTCCCACAGCAAGACACCTCTACGACATGTTGCATGCTCGAGCCATCTCTTGTTCCCATTTAACGAGCTAG 3357 0.4418 MQVSEPLVDGEQSNEDGEADKTSEDGSEGHILDEEPVHDVSGKTWELSLLDSSEDSIKGLYVYRNVFNLIPRSVGGFGSLKTLKFFANEINLFPSETGNLVELECLQVKISSPGLSGLPLQKLKALKELELCKVPPRPSAFTILSEITNLKCLTKLSVCHFTIRYLPPEIGCLNKLEDLDLSFNKLKSLPNEITALIALKSLKVANNKLVELPSGLSSLQRLESLDLSNNRLTSLGSLNLAPMQTLQKLNLQYNKLLNCCQIPSWICCNLEGNGKGTSNDAFISSLVKVDVFDAVVQKFDGSHSCNGSHATSLSLLSEASSSSRCSAARRMRKGWKRRDYLQQRARQERLNSIRKWRGDDHHQIVTMKVDAQCKACKLPAVGSESFCESSSLAEGASDIVKDLDDNDGQALASEDDPQNLCNHCEDEKLIFDSAGISKECDDECGGEPKPSSASSLDRIDEQDEDSSSDVSINTLKSKRHSDRDLDNPKPSKSRRPVDNHSSLSHRYSTESFCSINDRLPDGFYDAGRDRPFMPLQSYEQSLCLDSREVILVDRERDEELHVIILSAQALVSPLKQQSSLVEERKLLAVDNLQRASLLALFVSNWFGGSDRSNLIAKTRKAVAGSNYQKPFVCTCPTGNNEDGRTYSKQILSTAENFNFNDLCEKSLRIIKQANNSNVVPIGTLRWGVCRHRAVLMKYLCDRVDPPIPCELVRGYLDFLPHAWNTILVRRDNSWVRMVVDACCPTDIREETDPEVFCRYVPLSRIHVPVTAENIASPGCSFPSLSLCDEIEKAASSSLIRCKFGSVEAVAKVRTLKIYGASVEEAKNFEYTCLGEVRILGTLKKHSCIVEIYGHQISSKWVPPVDGNKEHRLLQSAIVMEYIEGGSLKNYVEKLSKSGEKHVQVELALFLARDVACALAELHSRHIIHRDVKSENILIDLDSKRVDGTPIVKLCDFDRAVPLRSFSHTCCISHLGIPPPDVCVGTPRWMAPEVLQAMHRRNIYGLEVDIWSYGCLLLELLTLQVPYAGLSDSEIHDLLQMGQRPRLTDELETLTSSKEPAMARSCTEAQGTRAEAETLRFLVDLFHQCTQGNPSDRPTARHLYDMLHARAISCSHLTS* 1119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g00902 1118 SUPERFAMILY Cysteine proteinases 683 746 IPR038765 -
Eupl07g00902 1118 PRINTS Leucine-rich repeat signature 176 189 - -
Eupl07g00902 1118 PRINTS Leucine-rich repeat signature 219 232 - -
Eupl07g00902 1118 PANTHER SERINE/THREONINE-PROTEIN KINASE SBK1 103 1113 - -
Eupl07g00902 1118 Pfam Leucine rich repeat 199 256 IPR001611 GO:0005515
Eupl07g00902 1118 FunFam Leucine-rich repeat protein kinase family protein 51 288 - -
Eupl07g00902 1118 SMART LRR_bac_2 173 192 - -
Eupl07g00902 1118 SMART LRR_bac_2 196 215 - -
Eupl07g00902 1118 SMART LRR_bac_2 243 262 - -
Eupl07g00902 1118 SMART LRR_bac_2 219 238 - -
Eupl07g00902 1118 SMART LRR_sd22_2 173 194 - -
Eupl07g00902 1118 SMART LRR_sd22_2 219 240 - -
Eupl07g00902 1118 Gene3D Ribonuclease Inhibitor 39 278 IPR032675 -
Eupl07g00902 1118 FunFam Leucine-rich repeat protein kinase family protein 830 1112 - -
Eupl07g00902 1118 SUPERFAMILY Protein kinase-like (PK-like) 784 1106 IPR011009 -
Eupl07g00902 1118 SMART serkin_6 784 1110 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl07g00902 1118 ProSiteProfiles Leucine-rich repeat profile. 175 196 IPR001611 GO:0005515
Eupl07g00902 1118 MobiDBLite consensus disorder prediction 441 503 - -
Eupl07g00902 1118 SUPERFAMILY RNI-like 56 264 - -
Eupl07g00902 1118 Pfam Protein kinase domain 823 1103 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl07g00902 1118 ProSitePatterns Serine/Threonine protein kinases active-site signature. 926 938 IPR008271 GO:0004672|GO:0006468
Eupl07g00902 1118 ProSiteProfiles Protein kinase domain profile. 784 1110 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl07g00902 1118 MobiDBLite consensus disorder prediction 475 501 - -
Eupl07g00902 1118 Pfam Ethylene-responsive protein kinase Le-CTR1 663 740 - -
Eupl07g00902 1118 SMART LRR_typ_2 219 240 IPR003591 -
Eupl07g00902 1118 SMART LRR_typ_2 77 100 IPR003591 -
Eupl07g00902 1118 SMART LRR_typ_2 173 195 IPR003591 -
Eupl07g00902 1118 SMART LRR_typ_2 196 218 IPR003591 -
Eupl07g00902 1118 Gene3D Transferase(Phosphotransferase) domain 1 784 1116 - -
Eupl07g00902 1118 MobiDBLite consensus disorder prediction 14 35 - -
Eupl07g00902 1118 ProSiteProfiles Leucine-rich repeat profile. 221 242 IPR001611 GO:0005515
Eupl07g00902 1118 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g00902 Eupl-Chr7 27324160 27335676 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g00902 835 1111 MAP Kinase Kinase Kinase AT1G63700 27.076 1.01e-20 96.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-2 Eupl07g00902 Pkinase 4.8e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g00902 - - nnu:104598673 1494.95