Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g00890 ATGACGACAGGGATGTTCCACGACCAGAAACTGGAGAAGCAGGTAGAGAAGCAGATGGGATGCATGACCGGATTCCTTCAGATCTTTGATCGCCACCAGATTCTTGTTGGAAAACGCCTCTACGCTACCAAACGACTGCCTCCCTCTCCGGCGATCGATTCTACATCCCAGTCGGAGAAGTCCGTTGGATCTCCTGTCTTCTCCAGTGAACTACAGCAGCACTTGCAGCAGCAACAACCTCAGCCGCGATCTTCGCCGGATTGTACGAAAACTCCGCCGGGAATCTGTTCTCCGGTGCCAGAACTTTCAACTCCGGCGGAGATTCAGGTGAGAACGCCTCCTCTCCCGGTTTTCGAATTCAAGGAAGCCTTGAGATCTTCGTGGAAGTTCAGAGAATCTCCGAGGCTGTCTCTGGACAGCAGAGCGACTGTCGATGGAAAGGGAAGCCTATATCCGAGGGAGATACGAACGAACGCCGCGATTTTATCTGCGACTCGGTGCGAGAGCTCTGCAGAAGGGACGAACGCGGAGGAGATGGATAAGCAGCGACGTTCGCCGAGCGTCATTGCGAGGCTTATGGGACTCGAAGCGTTACCCGATTCCGGTCGCGAACCCCTCAAGAAAGCAGAGCTAAGGAGGTCCGCTTCGGAGTCTAGGTCTGGAGATCTTCAGTATCGATTCATTGACGGGAACAACTTCCAGCTGAAGCAGTCGTACCAGCCGAATTCTGGAACTAATGGTTCCAACAATGCGATGAGGGAAAATGCAGTCGTAGAAGTTCACGGATCGGAAGCTCGAAGACCAGATTTGATGGAGTTTTGCGTTAGAAAACCAGAATCAGCGAAAGCTTCGAACGGAGGTTTGCCTATTTCACCATGGAAGTTGCAGCAGCAGCGTAGGAGCTTCTTCGACTCGCAGGATTTCTTTCCGGAGCCGAAGCAGACAGGATCTCTGTATGGAGAGATCGAGAAGCGGTTGAAGATGAGAGGAATCGATGAACCAGCAAAGGATCTAGAGACACTGAAGCAGATCCTCGAAGCTCTGCAACTCAAAGGACTCTTACATACTAAGAAAAGAGCAGAGCAGATCGGCCACCGTAATTTTGTCTTCGATCGGAGATTCTCCTCTGAAGAATCTCCAATCGTCATCATGAAGCCATCGAGATCGATGGTTTCGATGAATCGACCGGGAAGAACCGGAAACGATTCTCCACCTTCGAATTCAAGATCCAAAGCTGGAATTCGTCGGAATCTCAATCTCTCAGGCGAGAAACCTAGCCGTTATCGTCCGGAAATTGGTCGAAATCTGCAGACGGATAGAAGTGCCAGAAATTCAAAGTCGCCTGATCGGAGCGAGGGCAATGCGAAGAGTCCGAGTTCTCTAGCAAGGAGAAAACCATTAAGCATTGAGACGCAGAGGAGAGGAAATGATTCTATGGAGCAGCGGAGAAGCTCTCCTATTCACTCTCCAAAGATTACTTCAACGAAAACAGGATCAGATCAGACAACGAACAGATCACCGAGAAACAACAGGAGACCGACGGTTGAGATTTCTCCGAAAGAGAGGATTACCGTTCCGGTGGAGGACGAATCATCCTCCATTTCTGAGAGCAGTATCAGCACGTCTTCTCAAAACGATATAGAGTTGCAGAGACCGAAAATGGAGAATTACAAGGAAGGGAGGAGTCTTTTGGAGAGATGTGATAAGCTACTTCACAGCATAGCTGAGATCACAGCGGCCGAGTTGCAGCCGAGTCCCGTCTCGGTTCTCGACTCGTCCTTCTACAAGGACGAGTCGTCTCCTTCCCCTGTCATGAAGCGATGCATCGATTTCAAAGATCAATCAGTGGAGCTAGACGACGAGAACCGGAGCCCAGTGAACTCGCCCGTCCGATTGAAATCCGAAGATAAATCGGACGACTGTGATTACCTCTATGTCTCAGAGATCCTCCGAGCTTCCGACTACCTTTCTGAAGACTCAGATGTTTTCTTGTTACTTGAGAAACAACAATACAAGACGAATTCCTCTAAAATTTCCAGACTCCATCGGAAGCTTGTTTTCGACACAATTACAGAAATTCTGGATCAAAAGAGACAATTGCCGCCGTGGAAGGTCTTTTCTGGTGCAGATTTTGTTAATGGAAAGCCTTCATTGCGACAGATATGGTTGGAATTCTCGAGAATGAGAGAGAGAGAGACGAACGAAGACTTGTTGGAAGTCATTTGCGGAGTACTTCGGAAGGACATGGGCGGGGACGGGATCACCGGATGGAGAGATTGTCCGATGGAAATGTCGGAGGCCGTGTTGGATATCGAACGGCTGATATTCAAGGATCTAGTTGCAGAGACGATCCGTGATCTTGCTGCCTTTACCGGGAAAAGCATAGCCTTGGCGCCTCTTAGAAGGAAGTTAGTTTTTTGA 2421 0.4944 MTTGMFHDQKLEKQVEKQMGCMTGFLQIFDRHQILVGKRLYATKRLPPSPAIDSTSQSEKSVGSPVFSSELQQHLQQQQPQPRSSPDCTKTPPGICSPVPELSTPAEIQVRTPPLPVFEFKEALRSSWKFRESPRLSLDSRATVDGKGSLYPREIRTNAAILSATRCESSAEGTNAEEMDKQRRSPSVIARLMGLEALPDSGREPLKKAELRRSASESRSGDLQYRFIDGNNFQLKQSYQPNSGTNGSNNAMRENAVVEVHGSEARRPDLMEFCVRKPESAKASNGGLPISPWKLQQQRRSFFDSQDFFPEPKQTGSLYGEIEKRLKMRGIDEPAKDLETLKQILEALQLKGLLHTKKRAEQIGHRNFVFDRRFSSEESPIVIMKPSRSMVSMNRPGRTGNDSPPSNSRSKAGIRRNLNLSGEKPSRYRPEIGRNLQTDRSARNSKSPDRSEGNAKSPSSLARRKPLSIETQRRGNDSMEQRRSSPIHSPKITSTKTGSDQTTNRSPRNNRRPTVEISPKERITVPVEDESSSISESSISTSSQNDIELQRPKMENYKEGRSLLERCDKLLHSIAEITAAELQPSPVSVLDSSFYKDESSPSPVMKRCIDFKDQSVELDDENRSPVNSPVRLKSEDKSDDCDYLYVSEILRASDYLSEDSDVFLLLEKQQYKTNSSKISRLHRKLVFDTITEILDQKRQLPPWKVFSGADFVNGKPSLRQIWLEFSRMRERETNEDLLEVICGVLRKDMGGDGITGWRDCPMEMSEAVLDIERLIFKDLVAETIRDLAAFTGKSIALAPLRRKLVF* 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g00890 806 MobiDBLite consensus disorder prediction 392 415 - -
Eupl07g00890 806 MobiDBLite consensus disorder prediction 49 91 - -
Eupl07g00890 806 MobiDBLite consensus disorder prediction 482 513 - -
Eupl07g00890 806 MobiDBLite consensus disorder prediction 467 481 - -
Eupl07g00890 806 Pfam Domain of unknown function (DUF4378) 642 782 IPR025486 -
Eupl07g00890 806 MobiDBLite consensus disorder prediction 385 546 - -
Eupl07g00890 806 MobiDBLite consensus disorder prediction 45 101 - -
Eupl07g00890 806 Pfam DUF761-associated sequence motif 176 203 IPR032795 -
Eupl07g00890 806 PANTHER LONGIFOLIA PROTEIN 9 806 IPR033334 GO:0051513
Eupl07g00890 806 MobiDBLite consensus disorder prediction 528 546 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g00890 Eupl-Chr7 26868881 26872624 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g00890 509 806 TRM (TON1 Recruiting Motif) Superfamily AT3G63430 42.902 3.43e-63 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g00890 - - nnu:104609590 1105.89