Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g00872 ATGGATAGGGTGCTCCTGGATAAAATATCCGACCCGTTTTGGCCTCCGGCAGGACCGGCACCACCACCGACTCATTCATCGCCATCAGCAGCCGAAGATCCCAAAATGAATCGAAGCTCATCTGAATGGGCCTTTCAGAGATTTCTCTTAGAGGCCGAAACCTCACACTCTTCCGTCTCTGCTGCTACAGCTCCACCACCAGTTCTTCCCTCTATCGTATCTCCATCGCCTTCATCGAGAACCGATGTAGATGACGAAGTTGTGGAGATCAAGGAGCTTCCTCTTCCGCCGTCTGATCCCACGTTGAACGTTCCGATCGACTCGGAGGAGTACCAGGCAATTCTTAAGCGCCGTCTCAATCTGGCCTGCGCTGCTGTTGCGTTTTCTCGGGCATCTGCTGTAAAACCTCAAGATTCTGCTCCTTTAGCTGACAGTGGGTCACAGGCTTCAGAAACTTCACAGTTGGGATCTCAAGCTCTTGGTAATGGAACTGGGTATAGTTTCTCTCCGGGACAAGATGAGGCTGTTGGCGCACCGGTTGGCAATTCAGCCTCGCCCGCTGTGCAGAAAAAATCAGGAGTTCAGATTAGGCCAACGACCAGTAGTTCATCAAGAGAACAGTCAGAAGATGACGAGATTGAAGGAGAAACAGAAATGACAGAGAATATGGATCCTGCTGATGCAAAACGTGTAAGGAGGATGCTGTCAAATAGAGTGTCAGCTAGACGCTCTAGAAGAAGAAAACAAGCACATTTGAGTGAGCTCGAGACACAGGTTGCACAATTAAGAGTTGAAAACTCTCTGTTGTTGAAGCGTCTCAATGAGACAAATCAAAAGTACAATGAAGCTGCTGTTGACAATAGAATCTTAAAAGCGGATGTTGAAACACTGAGAGCAAAGACAATGATGGCTGAAGACACTGTTAAGAGAGTGACGGGCGTGAATCCGATGTTCCAGGCCATGTCTGAGATATCCACTGTGGGCATGGCATTCCCTGGCAACTCATCTGACACTTCTGCAGATGCTGCTGTCCCCATGCAAGACTACCCCAAGCAGCACTTCTATCAACCTGCTACCAATCCTCCTCCTAGTGTTACTTCATACAACCAGAGAGTGAACAATGGCTTGCCTGACATTCCTCCAGTATCCCCCGTGGATGACATCATGACGAGCAGAATGCCGCTGGGGGCAACAAGGTGGGCTGAACAGCTTCCATGCAGCAAGTAG 1227 0.4931 MDRVLLDKISDPFWPPAGPAPPPTHSSPSAAEDPKMNRSSSEWAFQRFLLEAETSHSSVSAATAPPPVLPSIVSPSPSSRTDVDDEVVEIKELPLPPSDPTLNVPIDSEEYQAILKRRLNLACAAVAFSRASAVKPQDSAPLADSGSQASETSQLGSQALGNGTGYSFSPGQDEAVGAPVGNSASPAVQKKSGVQIRPTTSSSSREQSEDDEIEGETEMTENMDPADAKRVRRMLSNRVSARRSRRRKQAHLSELETQVAQLRVENSLLLKRLNETNQKYNEAAVDNRILKADVETLRAKTMMAEDTVKRVTGVNPMFQAMSEISTVGMAFPGNSSDTSADAAVPMQDYPKQHFYQPATNPPPSVTSYNQRVNNGLPDIPPVSPVDDIMTSRMPLGATRWAEQLPCSK* 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g00872 408 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 227 282 IPR004827 GO:0003700|GO:0006355
Eupl07g00872 408 MobiDBLite consensus disorder prediction 141 169 - -
Eupl07g00872 408 SUPERFAMILY Leucine zipper domain 229 280 IPR046347 GO:0003700|GO:0006355
Eupl07g00872 408 MobiDBLite consensus disorder prediction 55 85 - -
Eupl07g00872 408 Coils Coil 245 279 - -
Eupl07g00872 408 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 232 247 IPR004827 GO:0003700|GO:0006355
Eupl07g00872 408 MobiDBLite consensus disorder prediction 130 252 - -
Eupl07g00872 408 MobiDBLite consensus disorder prediction 185 203 - -
Eupl07g00872 408 SMART brlzneu 225 289 IPR004827 GO:0003700|GO:0006355
Eupl07g00872 408 MobiDBLite consensus disorder prediction 1 39 - -
Eupl07g00872 408 MobiDBLite consensus disorder prediction 14 28 - -
Eupl07g00872 408 FunFam BZIP transcription factor 227 278 - -
Eupl07g00872 408 Pfam Basic leucine-zipper C terminal 296 387 IPR020983 -
Eupl07g00872 408 CDD bZIP_plant_GBF1 228 281 IPR045314 GO:0003700|GO:0006355
Eupl07g00872 408 Gene3D - 228 301 - -
Eupl07g00872 408 Pfam bZIP transcription factor 228 281 IPR004827 GO:0003700|GO:0006355
Eupl07g00872 408 PANTHER BASIC LEUCINE ZIPPER 63 1 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g00872 Eupl-Chr7 26546411 26556055 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g00872 6 322 bZIP Transcription Factor Family AT4G02640 41.033 8.47e-48 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Eupl07g00872 bZIP_C 2.7e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g00872 K25784 - nnu:104609567 418.313