Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g00857 ATGGAAAAAATGAAGAGAGAACACCTCTACTTTTCATGTTTCCAATTCCTGTTTCTACTCCAAAGCTTACAAGCCCAACCAAACATCACAGGCTACACATGCACGGCCGACCCATCGATCTATCCATGCCAGACCTACGCGTTCTACCGAGCCATAGCACCAGACCTGCTCGACCTGGCCACCATCGCCGACCTTTTCGGTATAAGCCGTCTCATGATAGCTAAACCAAGCAACATCTCCTCCCCAACCTCCCCTCTCATCCCTGATCAATCCCTCTTCGTCCCTTTAACATGCTCTTGCAATCCCACCACCAATCTCTCCTACGCCAACCTCACCTACACAATCAAAGAAGGTGACACCTTCTACCAAGTTTCCACCCACCAGTTCCAGAATCTCACCACTTACCAAGCTGTCGAGATCGTTAACCCATCTCTCATCCCTACTCTCCTTCAAATCGGCGTTAACGTTGTTTTTCCAATCTTTTGCAAGTGTCCCAACAAAACCCAGTTGGGAAACCGTCTCAATTATCTCATCACCTACGTTTTCCAACCTTCAGACACCTTGGCTTCGATTGCTACCAAGTTTGGATCAAATACACAGTCTTTAATCGATTTGAATGGAAATAATATTCAGCCTTCTGATACAATTTTCGTTCCCGTGTCGAGAATCCCTGTTCTGACACAGCCTTCTGTTCCTCCTTTATCTTCTCCTAAGACTGAGAGAAAAGGAGTTATAATTGGATTGGCTGTTGGGGTGGGAGTTTTGGGTTTTCTGTTAGTTCTCTTGATTTTGGTTATGGGTTTATGGTTTTACAGAGAATTCTTTGTGAAAAAGAGTGGGAAAATGAGAGAAGAGGAGGAGAAGCAGTATCAGTACAGGCGAGCGAAGTCGTCGGATGAGGAGGTGAATTTCATGGCCGATGTATCGGACTGCTTAGATAAGTATAGAGTGTATGGGATTCAAGAGGTGAGAGAAGCAACTGCTGGGTTCGCTCCGAGTTCTGTGATTCTGGGTTCTGTGTATAAAGGGTGTATTGGTGGGGAGGTCTATGCCATTAAGAAGATGAAGTGGAACGCCTGTGAAGAACTCAAGATCTTACAGAAGGTAAACCATGGCAATCTGGTGAAGCTGGAAGGCTTCTGTATAGACCCTGAAGATGGTAACTGCTATCTCGTCTACGAGTACATCCAGAACGGATCTCTTCATTCATGGCTTCATGGGGACATCAAGATTAAGAAGAAGCTTGACTGGAAAACAAGGTTAAGGGTTGCTATCGATGTTGCAAATGGTCTCCAGTACATCCACGAGCACACGAGGCCAAAGGTGGTACATAAAGACATCAAAACTAGCAATATTCTGCTTGATGGAAATATGAGGGCCAAGATTGCCAATTTTGGGCTAGCGAAGTCTGGTTGTAATGCCATAACCGCGCATATTGTTGGTACTCAAGGTTATATTGCACCAGAGTATCTTGCAGATGGGATTGTAACAACAAGAATGGATGTTTTTGCCTTTGGGGTGGTTCTACTTGAGCTAATTTCTGGCAAGGAAGCCATCAATGAGGAAGGGGAGGTCATGTGGACAAATGTCAATAGAGTCCTCGAGGGAAGGGAAGATGGTAAGTATCAGAGGCTGAAGGAATGGATGGATGAGGCTCTTGTTCAGGAAGGTTGCTTGATAGAGAGCGTGATGAATGTAATGACTATTGCTGTTGCATGCATACAGAGAGACCCTTCGAAGCGACCGAATATGATAGATATTGTCTACACATTATGTAAGAGTGACGATTTGAACTTGGATTTCTCAGAGGATGGAATATCAGTCGGTCCTGTAACGGCCAGATGA 1845 0.4499 MEKMKREHLYFSCFQFLFLLQSLQAQPNITGYTCTADPSIYPCQTYAFYRAIAPDLLDLATIADLFGISRLMIAKPSNISSPTSPLIPDQSLFVPLTCSCNPTTNLSYANLTYTIKEGDTFYQVSTHQFQNLTTYQAVEIVNPSLIPTLLQIGVNVVFPIFCKCPNKTQLGNRLNYLITYVFQPSDTLASIATKFGSNTQSLIDLNGNNIQPSDTIFVPVSRIPVLTQPSVPPLSSPKTERKGVIIGLAVGVGVLGFLLVLLILVMGLWFYREFFVKKSGKMREEEEKQYQYRRAKSSDEEVNFMADVSDCLDKYRVYGIQEVREATAGFAPSSVILGSVYKGCIGGEVYAIKKMKWNACEELKILQKVNHGNLVKLEGFCIDPEDGNCYLVYEYIQNGSLHSWLHGDIKIKKKLDWKTRLRVAIDVANGLQYIHEHTRPKVVHKDIKTSNILLDGNMRAKIANFGLAKSGCNAITAHIVGTQGYIAPEYLADGIVTTRMDVFAFGVVLLELISGKEAINEEGEVMWTNVNRVLEGREDGKYQRLKEWMDEALVQEGCLIESVMNVMTIAVACIQRDPSKRPNMIDIVYTLCKSDDLNLDFSEDGISVGPVTAR* 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g00857 614 CDD LysM 178 218 IPR018392 -
Eupl07g00857 614 Gene3D LysM domain 167 226 IPR036779 -
Eupl07g00857 614 SMART LysM_2 112 159 IPR018392 -
Eupl07g00857 614 SMART LysM_2 179 219 IPR018392 -
Eupl07g00857 614 Pfam LysM domain 180 218 IPR018392 -
Eupl07g00857 614 CDD LysM 112 153 IPR018392 -
Eupl07g00857 614 Gene3D Phosphorylase Kinase; domain 1 299 395 - -
Eupl07g00857 614 Gene3D Transferase(Phosphotransferase) domain 1 396 604 - -
Eupl07g00857 614 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 17 593 - -
Eupl07g00857 614 SUPERFAMILY LysM domain 178 220 IPR036779 -
Eupl07g00857 614 ProSiteProfiles Protein kinase domain profile. 244 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl07g00857 614 FunFam PTI1-like tyrosine-protein kinase 3 396 599 - -
Eupl07g00857 614 Pfam Protein kinase domain 348 587 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl07g00857 614 SUPERFAMILY Protein kinase-like (PK-like) 337 591 IPR011009 -
Eupl07g00857 614 ProSiteProfiles LysM domain profile. 178 225 IPR018392 -
Eupl07g00857 614 ProSitePatterns Serine/Threonine protein kinases active-site signature. 442 454 IPR008271 GO:0004672|GO:0006468
Eupl07g00857 614 SMART serkin_6 330 593 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g00857 Eupl-Chr7 26152931 26157719 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g00857 28 593 Receptor kinase-like Gene Family AT2G23770 33.055 5.23e-88 284
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Eupl07g00857 Pkinase 7.9e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g00857 - - nnu:104589641 827.009