Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g00854 ATGGCTAATAACCCGCAGGAAGGACTAACCGACGATTTCCTTGAACAGATCTTAGCAATTCCATCTTACCCTGGAAATGAGTCTGTTTTGGCGGGGAATTATGGGAATTTGGCGGGAACGGCGGCTTCGATGGTGTTGCAGCTGAGCTCCGGCGAAGGCTCAGGTCATATCGCCGGAGGTGGTTTTCAGGGAAGCTATTATCCGTTAGGGTTGAGCTTGGAGCAGGGGAAGAGCGGTTTTGTGAAACCAGAGGAGATGTACGCGAGCGGTAAGCGGTTTCGGGAGGTGGTTGATGAGAAAGCTGCTTCTGGAAAGAACGAAAGTGAATCCGCGCATTTGACGAATTTGTTCCCGGCGTTCGGACATGTACGGCCTCACTCGATCCGGCCTACCGCTCCTCTAGTCCACCAGCCTTTCCATCCGCAACCAACGCCTGGTGCAGTTGCTATCATGTCACACCCACCTATTATCCGTCCAAGAGTGCGGGCAAGACGTGGGCAAGCCACTGATCCCCACAGTATTGCCGAGCGGTTACGTAGAGAGAGAATAGCAGAAAGAATGAAAGCTTTGCAGAAACTAGTTCCTAGCACCAACAAGACAGATAGAGCAGCCATGCTTGATGAGATTCTGGATTATGTGAAGTTCTTAAGGCTCCAAGTCAAGGTTCTGAGCATGAGCAGACTGGGAGGAGCCGGTGCAGTGGCTCAGCTTGTAGCTGACATCCCACTACCATCAGTTGAGGGGGAAACAAGCCAGGGTGGAAGCAACCAAGCATGGGAGAAGTGGTCAACTGATGGCACAGAACGACGAGTAGCAAAGCTCATGGAGGAAGACGTTGGTGCTGCTATGCAGTTCCTCCAATCCAAAGCACTCTGCATCATGCCTGTATCACTTGCCACAGCGATTTACCACACACACCAACCCAACCTCCCCCCACTTGTCAAGCCCGAATCGAACACCCCTTGA 966 0.5228 MANNPQEGLTDDFLEQILAIPSYPGNESVLAGNYGNLAGTAASMVLQLSSGEGSGHIAGGGFQGSYYPLGLSLEQGKSGFVKPEEMYASGKRFREVVDEKAASGKNESESAHLTNLFPAFGHVRPHSIRPTAPLVHQPFHPQPTPGAVAIMSHPPIIRPRVRARRGQATDPHSIAERLRRERIAERMKALQKLVPSTNKTDRAAMLDEILDYVKFLRLQVKVLSMSRLGGAGAVAQLVADIPLPSVEGETSQGGSNQAWEKWSTDGTERRVAKLMEEDVGAAMQFLQSKALCIMPVSLATAIYHTHQPNLPPLVKPESNTP* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g00854 321 Gene3D - 164 230 IPR036638 GO:0046983
Eupl07g00854 321 Pfam Helix-loop-helix DNA-binding domain 172 216 IPR011598 GO:0046983
Eupl07g00854 321 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 56 302 - -
Eupl07g00854 321 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 165 226 IPR036638 GO:0046983
Eupl07g00854 321 SMART finulus 173 222 IPR011598 GO:0046983
Eupl07g00854 321 FunFam Transcription factor bHLH66 164 229 - -
Eupl07g00854 321 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 167 216 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g00854 Eupl-Chr7 26090892 26100767 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g00854 62 321 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G02590 61.654 6.54e-91 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Eupl07g00854 HLH 1e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g00854 - - nnu:104589640 496.893