Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g00835 ATGGCGGCGGAAACTCTGCATCTGCGTAAGGAAGGCGACAACGAACAGGTGGTCGTGGTTGCGCCGGTTAAGGAGATGCACTTTAGAGGCGTACGTAAGCGTCCATGGGGACGATTCGCAGCTGAGATTCGAGATCCGTGGAAGAAGACGAGGAAATGGCTTGGAACATTCGACACTGCTGAAGAGGCGGCGAGGGCTTACGACGACGCTGCTAGGAATCTCCGTGGACCTAAGGCCAAGACGAATTTCGGCGACGGAGGAATCAACGGATCGGCGACTTCTGGAACGTTCCAGAAACATCTGCAGCAGTGGAGAACGGCCTATGTTGCCGGAGATGGCCGGAATATCTTTTCATCGACTGGAGCTCCGGCTCCGGCGGGATCGGAATATTCCGGGTATAAATTCGAGGCCGTGGAGGTGGTGGTGAAGAGCGAGCAAGAGAAAAAGATGAGAAAAGAGGAGAAGAAACCGTTATCGTTCGATCTCAATCTCCCGCCACCGCTCTTCTGA 510 0.5451 MAAETLHLRKEGDNEQVVVVAPVKEMHFRGVRKRPWGRFAAEIRDPWKKTRKWLGTFDTAEEAARAYDDAARNLRGPKAKTNFGDGGINGSATSGTFQKHLQQWRTAYVAGDGRNIFSSTGAPAPAGSEYSGYKFEAVEVVVKSEQEKKMRKEEKKPLSFDLNLPPPLF* 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g00835 169 ProSiteProfiles AP2/ERF domain profile. 27 84 IPR001471 GO:0003700|GO:0006355
Eupl07g00835 169 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 16 124 - -
Eupl07g00835 169 SMART rav1_2 27 90 IPR001471 GO:0003700|GO:0006355
Eupl07g00835 169 FunFam Ethylene-responsive transcription factor 2 26 85 - -
Eupl07g00835 169 CDD AP2 27 83 IPR001471 GO:0003700|GO:0006355
Eupl07g00835 169 Gene3D AP2/ERF domain 26 84 IPR036955 GO:0003700|GO:0006355
Eupl07g00835 169 PRINTS Ethylene responsive element binding protein signature 50 66 IPR001471 GO:0003700|GO:0006355
Eupl07g00835 169 PRINTS Ethylene responsive element binding protein signature 28 39 IPR001471 GO:0003700|GO:0006355
Eupl07g00835 169 MobiDBLite consensus disorder prediction 146 169 - -
Eupl07g00835 169 Pfam AP2 domain 27 76 IPR001471 GO:0003700|GO:0006355
Eupl07g00835 169 SUPERFAMILY DNA-binding domain 27 84 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g00835 Eupl-Chr7 25661226 25662226 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g00835 5 168 AP2-EREBP Transcription Factor Family AT5G44210 40.957 1.12e-36 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Eupl07g00835 AP2 5.7e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g00835 K09286 - nnu:104612420 236.113