Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g00833 ATGTCGCCTGTCGAAGAAGGTGCAGTCGTCGAACCTGCTTCAGATCCAGCGCCGGCAGAGCCTGCAGAGGAGAAACCGGCAACGAAAGCTGCGAAGACGAAGAAGGCGAATCCTCCAAAAGAGCCGAAGGCCAAGAAACCGGCCGGTCCTAAAAAACCTAGGACTGCTCCTTCTCACCCTCCTTATATAGAGATGATCCAAGAGGCGATCGTTGCACTTAAAGAGAGGACTGGTTCGAGCCAGTATGCAATCGCCAAGTTCATCGAAGACAAGCACAAATCACATCTCCCTCCCAGCTTCAAGAAGCTTTTGCTCTACCACCTCAAGAAGCTAGTCACTGCTGGCAAGCTCGTTAAGGTTAAGAACTCATACAAGCTTCCTGCTAAATTGGCGCCGCCAAAGCCTGCTCCCACCAAGAAACCGGCTGCTTCATATGCACCAGCGAAGCCGAAGCCTGCACCGAAGCCAAAGGCTAAATCTAAGCCGAAAGCTGCACCAAAACCAAAAGCACCAGCTAAGCCGAAACCAGTTGCGAAGCCCAAAGCTGCCCCAGCCAAGCCGAAGGCTGCAGCGAAGCCGAAACCCGCTGCCAAGCCGAAGGCCGTTGCCAAGCCAAAACCGAAGCCAAAGCCGAAGCCGAAGGCTAGACCAGCAAAAGCTTCAAGAACTTCGACGAGGACTTCTCCGGGGAAAAAAGCCCCACCTGCAAAACCAGCAGCGGCGGCTAAGAAGGCACCTGCGAAGAGTCCGAAGAAGTCGAAGCCCGTGAAGCCGCCGGCGAAAAAAGCTCCGGCAAGGAAGGCTAAGAAGTGA 813 0.5449 MSPVEEGAVVEPASDPAPAEPAEEKPATKAAKTKKANPPKEPKAKKPAGPKKPRTAPSHPPYIEMIQEAIVALKERTGSSQYAIAKFIEDKHKSHLPPSFKKLLLYHLKKLVTAGKLVKVKNSYKLPAKLAPPKPAPTKKPAASYAPAKPKPAPKPKAKSKPKAAPKPKAPAKPKPVAKPKAAPAKPKAAAKPKPAAKPKAVAKPKPKPKPKPKARPAKASRTSTRTSPGKKAPPAKPAAAAKKAPAKSPKKSKPVKPPAKKAPARKAKK* 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g00833 270 MobiDBLite consensus disorder prediction 154 168 - -
Eupl07g00833 270 SUPERFAMILY "Winged helix" DNA-binding domain 57 140 IPR036390 -
Eupl07g00833 270 PRINTS Histone H5 signature 45 66 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Eupl07g00833 270 PRINTS Histone H5 signature 145 159 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Eupl07g00833 270 PRINTS Histone H5 signature 72 89 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Eupl07g00833 270 PRINTS Histone H5 signature 175 192 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Eupl07g00833 270 PRINTS Histone H5 signature 197 216 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Eupl07g00833 270 MobiDBLite consensus disorder prediction 25 48 - -
Eupl07g00833 270 MobiDBLite consensus disorder prediction 199 219 - -
Eupl07g00833 270 CDD H15 56 129 IPR005818 GO:0000786|GO:0003677|GO:0006334
Eupl07g00833 270 SMART h15plus2 56 123 IPR005818 GO:0000786|GO:0003677|GO:0006334
Eupl07g00833 270 MobiDBLite consensus disorder prediction 247 270 - -
Eupl07g00833 270 MobiDBLite consensus disorder prediction 1 63 - -
Eupl07g00833 270 ProSiteProfiles Linker histone H1/H5 globular (H15) domain profile. 58 128 IPR005818 GO:0000786|GO:0003677|GO:0006334
Eupl07g00833 270 Gene3D - 54 142 IPR036388 -
Eupl07g00833 270 Pfam linker histone H1 and H5 family 59 125 IPR005818 GO:0000786|GO:0003677|GO:0006334
Eupl07g00833 270 PANTHER HISTONE H1 28 198 - -
Eupl07g00833 270 MobiDBLite consensus disorder prediction 117 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g00833 Eupl-Chr7 25596505 25597850 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g00833 65 127 Single Myb Histone (SMH) Gene Family AT1G49950 49.206 7.41e-11 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g00833 K11275 - nnu:104612416 134.42