Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g00824 ATGGCTCCTCTGCGACTACTATTGTTGGTTCAGGAACTCATCAGTACCATCCTTCTGTTATTATTATTATTAAGAGATACAGAAGCAGCAGCAGCACCAGCAGTACTATCTATGGCGAAGCCAGGTTGCCAAGAGAGATGCGGGAACATCAGTATTCCCTACCCATTTGGTATTGGGAGGAATTGCTACAGAGACGAAGGATTCGAGATCACTTGCAACTACACTTCTAACTCTTCAGTACTTCCCATCAATTCAATTGGATACCGAGTTCTAGAACTCTCACTGGACTATGTCCGCGTCCTTTGGTGGTCACCCCTCAATTGTTACGACGAGACTGGGAGCGGTTACTTGACTGAAGTTTCGGACAAGAATGGGTCGTTGCATCCCTTCACTTTCTCCCACACTCGCAATAAATTCATGGTCATCGGCTGTGACATATTTGCCTACATCCCCACTTCCAGTGTCAACAGCCAAAACTACACAACCGGGTGCGCAGCTCTCTGTGGCAACGAAACAATGGATGTCCGTTCATCTTGCTCTGGCAACGGCTGCTGCCAGTCCACTATTCCCACAGGGCTCAACTATTGGAGTGTGCGAATCGATAGCATCAACACGGTCCACCGGTCCTGGATCCACTATCCCTGTAGCTTTGCCTTCCTGGTCGACAATGACTTTTCCGACTTCCATATATTCAATCTTTCGTCCTATAATTATTCGAGCGTCTCAATCCCGGGCGTGCTGGACTGGGCAATAGGGAACATCACCTGCGAAGAAGCGAAGAGAAACTCCACCAGTTATGCATGTGGTCACAACACCCACTGCATTAACTCCACCAACGGTCCGGGGTACCATTGTAATTGCAATCAAGGGTACAAAGGGAACCCTTACCTCCCCCACGGATGCCAAGATATCGACGAGTGCAAAGACAAAAAGATTTGTAAAAACGGAGCTCTTTGCACTAACACAAAGGGGAGCTTTTATTGCGTTTGCCCACCCGGTTACCGTGACGATGTCAGTGGTTGTGTACACGACAAACGAAGCCTTCCAGTGGCTGTGGTTCTTCCATTAGGTTTTGGATTAAGCATATGTTTATTAATTTTACTTGCCATCGGTTTCTGGTTGTATCTCCGACTTGAGAAAAGAAAGCAAATAAACCTCAAACAGAAAAATTTCAAGAGAAATGGTGGTTTATTGTTGAAACAACAAATCTCTACAGATGATGGCTGCGTGGAGAAAGCCAAAATTTTTGTGACTGAAGAATTGGAAAGAGCAACGGACAATTTCAACCAAAGTCGAGTTCTGGGCAAAGGAGGGTTTGGTACAGTTTATAAAGGCATGTTATCAGATGGTAAGATAGTAGCCATTAAGAAGTCCAAATTAGTGGATGAAAGCCAAGTTAGTCAATTCATTAATGAAGTTGCCATTCTTTCACAGATCAACCATAGGCACATAGTGAAATTGTTAGGCTGTTGTTTAGAGACCCAAGTTCCATTATTGGTTTATGAATTTGTCTCTAATGGGACCCTCTTCCACCATCTCCACGATGAGAGCCATATGTCATCGCTTTCTTGGGAATACCGGTTACGGATTGCATCTGATATTGCAGGAGCACTTGCCTATTTGCACTCATCCACTTCTATACCTATCTTTCACAGAGACATAAAGTCTAGCAACATACTCTTGGATGAAAATTATAGGGCTAAAGTGTCTGACTTTGGACTTTCAAGGTCAGTTCCCATTGATAAAAC 1748 0.4445 MAPLRLLLLVQELISTILLLLLLLRDTEAAAAPAVLSMAKPGCQERCGNISIPYPFGIGRNCYRDEGFEITCNYTSNSSVLPINSIGYRVLELSLDYVRVLWWSPLNCYDETGSGYLTEVSDKNGSLHPFTFSHTRNKFMVIGCDIFAYIPTSSVNSQNYTTGCAALCGNETMDVRSSCSGNGCCQSTIPTGLNYWSVRIDSINTVHRSWIHYPCSFAFLVDNDFSDFHIFNLSSYNYSSVSIPGVLDWAIGNITCEEAKRNSTSYACGHNTHCINSTNGPGYHCNCNQGYKGNPYLPHGCQDIDECKDKKICKNGALCTNTKGSFYCVCPPGYRDDVSGCVHDKRSLPVAVVLPLGFGLSICLLILLAIGFWLYLRLEKRKQINLKQKNFKRNGGLLLKQQISTDDGCVEKAKIFVTEELERATDNFNQSRVLGKGGFGTVYKGMLSDGKIVAIKKSKLVDESQVSQFINEVAILSQINHRHIVKLLGCCLETQVPLLVYEFVSNGTLFHHLHDESHMSSLSWEYRLRIASDIAGALAYLHSSTSIPIFHRDIKSSNILLDENYRAKVSDFGLSRSVPIDK 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g00824 582 Gene3D Laminin 255 305 - -
Eupl07g00824 582 CDD EGF_CA 303 335 - -
Eupl07g00824 582 SUPERFAMILY Protein kinase-like (PK-like) 412 580 IPR011009 -
Eupl07g00824 582 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 319 330 IPR000152 -
Eupl07g00824 582 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 29 582 IPR045274 GO:0007166
Eupl07g00824 582 FunFam Wall-associated receptor kinase 2 398 503 - -
Eupl07g00824 582 FunFam latent-transforming growth factor beta-binding protein 4 isoform X1 305 342 - -
Eupl07g00824 582 Gene3D Transferase(Phosphotransferase) domain 1 504 582 - -
Eupl07g00824 582 Pfam Wall-associated receptor kinase galacturonan-binding 43 97 IPR025287 GO:0030247
Eupl07g00824 582 SMART serkin_6 428 582 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl07g00824 582 ProSitePatterns Protein kinases ATP-binding region signature. 434 457 IPR017441 GO:0005524
Eupl07g00824 582 Gene3D Laminin 306 343 - -
Eupl07g00824 582 ProSiteProfiles EGF-like domain profile. 260 302 IPR000742 -
Eupl07g00824 582 ProSiteProfiles EGF-like domain profile. 303 340 IPR000742 -
Eupl07g00824 582 ProSitePatterns Calcium-binding EGF-like domain signature. 303 328 IPR018097 GO:0005509
Eupl07g00824 582 ProSiteProfiles Protein kinase domain profile. 428 582 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl07g00824 582 FunFam Wall-associated receptor kinase 2 254 304 - -
Eupl07g00824 582 SUPERFAMILY EGF/Laminin 302 338 - -
Eupl07g00824 582 Pfam Calcium-binding EGF domain 303 339 IPR001881 GO:0005509
Eupl07g00824 582 ProSitePatterns Serine/Threonine protein kinases active-site signature. 549 561 IPR008271 GO:0004672|GO:0006468
Eupl07g00824 582 Gene3D Phosphorylase Kinase; domain 1 400 503 - -
Eupl07g00824 582 Pfam Protein kinase domain 428 578 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl07g00824 582 SMART egfca_6 303 342 IPR001881 GO:0005509
Eupl07g00824 582 SMART egfca_6 256 302 IPR001881 GO:0005509
Eupl07g00824 582 SMART egf_5 306 342 IPR000742 -
Eupl07g00824 582 SMART egf_5 255 302 IPR000742 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g00824 Eupl-Chr7 25350198 25360937 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g00824 30 582 Receptor kinase-like Gene Family AT1G21230 43.478 2.04e-143 430
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Eupl07g00824 Pkinase 1.8e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g00824 - - psom:113309694 640.958