Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g00816 ATGTGTCCGTCTTCTCAAATGGCTCCTCTGCGAGTTTTATTGTTTCAGGAACTCATCACCATCGTCTTCATTCTATTATTATTATTTTTAAGAGATACAGAAGCAGCAGCAGCAGTATCTATGGCGAAGCGAGGTTGTCAAGAGACATGCGGGAATGTCAGCATTCCCTATCCATTTGGTATTGGGAGGGATTGTTACAGAGACGAAGGGTTCGAAATCAATTGCACCTACACTTCTAACAATTCAGTTCCCTTCAATTCATTAGGACAGCAAGTTCAACAATTCTCCCTGGACTATGTGCGCGTCATTTCGGGGGCTGTCGTCAATTGTTACAACACCACGACCGGGATGGGTGAATGGGTTGAAATATTCACCTCTGACTGGTCGTTGAACCCCTTCACTTTCTCCAACACGCGCAATAAATTCGCGGCCATCGGCTGTGACATATTTGCCTACATCCCCACTTCCAGTTTCAACAGCCAAAACTACACAAGCGGGTGTGCAGCTCTTTGTGGAAATGAAACAGTGGATGTGCCTTCATCTTGCTCTGGCAATGGTTGCTGCCAGACCACTATTCCCACAGGACTCAAATCTTGGAAAATGCGAATCAATAGCATCAACACGGTCAACCGCTCATGGATCCCCAATCCCTGTAGCTTTGCCTTCCTGGTCGACAAAGACTTTTCCGACTTCTACATATTCAATCTTTCCTCCATTGCTTACAGGCATAGTTTTTGGACCGATGACTTCAAAATCCCGCTGGTGCTGGACTGGGCAATAGGGAACATCACGTGCAATGAAGCGATCGGAAACTCCACCAGTTATGCATGCGGCAACAACAGCCACTGCAGTAACTCCACCAATGGCCCTGGGTACAATTGTAATTGCAATCGAGGGTACCAGGGGAACCCTTACCTCCCCCAAGGATGCCTAGATATTGATGAGTGCAAGGACTCCAAAAAAAATCTCTGTCAAAAGGAAGCTCACTGCATTAACACACAAGGTAGCTACTTTTGTTCTTGCCCAACTGGTTACCAAGGTGACGGTAGATTTCGTGGAAGCGGCTGCACACGTGACAAACGAAAACTTCCTGTGGTTGTGGTTGTTCTATTAGGTTTTGGAATAAGCATAGGTTTAATAATTTTACTTGCCATCGGTTGCTGGATGTATCACCGACTTGAGAAAAGAAAGCAAATGAACCTCAAACAAAAATTTTTCAAGCGAAATGGTGGTTTATTATTAAAACAACAAATCTCTACAGAGGATGGTAGCGTTGAGAAAGCCAAAATCTTTGTTACTGAAGAATTGGAAAGGGCAACAGACAATTTCAACCAAAGTCGAGTTTTGGGCAAAGGAGGTTTCGGTACAGTTTATAAAGGTATGCTATCAGATGGAAAGATAGTAGCCATTAAGAAGTCCGTATTAGTGGATGAAAGCCAAGTTAGTCAATTCATTAATGAAGTTGCCATTCTTTCACAGATCAACCACAAGCACATAGTGAAATTGTTAGGTTGTTGCTTAGAGACCCAAGTTCCCTTATTAATTTATGAATATGTTTCTAATGGGACCCTCTTCCACCATCTCCATGATGAGAGCCATATGTCGTCACTTTCTTGGGAAAATCGATTAAGGATTGCATCTGAAATTGCAGGAGCACTTGCCTATTTGCACTCAGCCACTTCTATACCTATCTTTCACAGAGACATAAAGTCAAGCAACATACTCTTGGATGAAAATTTTAGGGCTAAAGTGTCTGACTTTGGACTTTCAAGATCAGTTCCCATTGATAAAACACATTTAACTACAGTAGTACAGGGGACTTTTGGTTACTTGGATCCAGAGTACTTCCATTCAAGCCAATTTACGGAAAAGAGTGACGTTTACAGTTTTGGAGTAGTTCTTGTGGAGCTCATAACTGGTGAAAGGGCAGTTTCTTTTGGTAGATCTGAAGAAGGAAAAAATCTAGCTATGTATTTCATATCGTCAATAAAAGAAAATCGTCTATTTGAAGTTCTAGAGACTCGAGTTGTGAATGAAGGGGACAAAGAGGAGCTTATGGCTGTTGCTAAGCTTGCAAAGAGATGTTTAAAATTGAATGGGAAAAAAAGGCCGACTATGAAAGAAGTAGCATCAGATCTTGATAGATTGAGGGGGTTTCAGGAGCATCCATGGGTAGGACAAAAGAACCAGAAGGACGAATGCTTACTAGGAGAAACATCATCTTGTTACACAGGTGGTACAATTGGAGAAACGTCATCTTGTTACACAGATAGTACAATTGGGTTAGAGAGTTTTGGAACTACTGTGTCGACAACAAACTAA 2322 0.422 MCPSSQMAPLRVLLFQELITIVFILLLLFLRDTEAAAAVSMAKRGCQETCGNVSIPYPFGIGRDCYRDEGFEINCTYTSNNSVPFNSLGQQVQQFSLDYVRVISGAVVNCYNTTTGMGEWVEIFTSDWSLNPFTFSNTRNKFAAIGCDIFAYIPTSSFNSQNYTSGCAALCGNETVDVPSSCSGNGCCQTTIPTGLKSWKMRINSINTVNRSWIPNPCSFAFLVDKDFSDFYIFNLSSIAYRHSFWTDDFKIPLVLDWAIGNITCNEAIGNSTSYACGNNSHCSNSTNGPGYNCNCNRGYQGNPYLPQGCLDIDECKDSKKNLCQKEAHCINTQGSYFCSCPTGYQGDGRFRGSGCTRDKRKLPVVVVVLLGFGISIGLIILLAIGCWMYHRLEKRKQMNLKQKFFKRNGGLLLKQQISTEDGSVEKAKIFVTEELERATDNFNQSRVLGKGGFGTVYKGMLSDGKIVAIKKSVLVDESQVSQFINEVAILSQINHKHIVKLLGCCLETQVPLLIYEYVSNGTLFHHLHDESHMSSLSWENRLRIASEIAGALAYLHSATSIPIFHRDIKSSNILLDENFRAKVSDFGLSRSVPIDKTHLTTVVQGTFGYLDPEYFHSSQFTEKSDVYSFGVVLVELITGERAVSFGRSEEGKNLAMYFISSIKENRLFEVLETRVVNEGDKEELMAVAKLAKRCLKLNGKKRPTMKEVASDLDRLRGFQEHPWVGQKNQKDECLLGETSSCYTGGTIGETSSCYTDSTIGLESFGTTVSTTN* 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g00816 773 SMART egfca_6 312 357 IPR001881 GO:0005509
Eupl07g00816 773 Pfam Wall-associated receptor kinase galacturonan-binding 46 96 IPR025287 GO:0030247
Eupl07g00816 773 FunFam Wall-associated receptor kinase 2 413 518 - -
Eupl07g00816 773 SUPERFAMILY EGF/Laminin 312 349 - -
Eupl07g00816 773 Gene3D Phosphorylase Kinase; domain 1 414 518 - -
Eupl07g00816 773 Gene3D Transferase(Phosphotransferase) domain 1 519 736 - -
Eupl07g00816 773 SUPERFAMILY Protein kinase-like (PK-like) 427 713 IPR011009 -
Eupl07g00816 773 FunFam Wall-associated receptor kinase 2 263 310 - -
Eupl07g00816 773 ProSitePatterns Protein kinases ATP-binding region signature. 449 472 IPR017441 GO:0005524
Eupl07g00816 773 ProSiteProfiles EGF-like domain profile. 269 311 IPR000742 -
Eupl07g00816 773 Gene3D Laminin 264 314 - -
Eupl07g00816 773 CDD EGF_CA 312 348 - -
Eupl07g00816 773 FunFam Fibrillin 2 311 352 - -
Eupl07g00816 773 FunFam Wall-associated receptor kinase 2 519 735 - -
Eupl07g00816 773 ProSiteProfiles Protein kinase domain profile. 443 725 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl07g00816 773 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 330 341 IPR000152 -
Eupl07g00816 773 SMART egf_5 264 311 IPR000742 -
Eupl07g00816 773 SMART egf_5 315 357 IPR000742 -
Eupl07g00816 773 CDD STKc_IRAK 449 716 - -
Eupl07g00816 773 Pfam Protein kinase domain 443 710 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl07g00816 773 ProSitePatterns Serine/Threonine protein kinases active-site signature. 564 576 IPR008271 GO:0004672|GO:0006468
Eupl07g00816 773 ProSiteProfiles EGF-like domain profile. 312 348 IPR000742 -
Eupl07g00816 773 Gene3D Laminin 315 352 - -
Eupl07g00816 773 Pfam Calcium-binding EGF domain 312 347 IPR001881 GO:0005509
Eupl07g00816 773 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 36 725 IPR045274 GO:0007166
Eupl07g00816 773 SMART serkin_6 443 725 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl07g00816 773 ProSitePatterns Calcium-binding EGF-like domain signature. 312 339 IPR018097 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g00816 Eupl-Chr7 25192155 25197684 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g00816 20 758 Receptor kinase-like Gene Family AT1G21230 43.974 0.0 586
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Eupl07g00816 Pkinase 2.9e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g00816 - - psom:113309694 820.076