Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g00786 ATGGAATCCGGCCAACAACACGACTCGAAGACCTCCAGCGAAGAAAGTGATAATAAGGCAGATCAAGTCAACGACGACGCAGGTACTGGCCGCTCCTACGAATGTGTGTTTTGCAAGCGAGGCTTCACCACTGCACAGGCTTTGGGTGGGCACATGAACATCCATAGGAAAGATAGAGCCAAGATCAGGCAGCCTACAGTTCCTTCAGTTTCCAACCAACCCATGGAGGAGTATGCAAGACCTGGGTTTTCCATGAAAATTTCAACTGACTCTCCATTTTCTTCTCCAGCCCTAGAGACACATAGGAATTATCAAACATTTTATCCGGCATCGACATCTATCACTAGACATGGACATGGGTACCACGCAGAAGATTTATTGCACATTCAAAATCCACGGCCGTTGAGTCTCTTCGAGGAAGATCGGCACACAAATTTGAGCTTGCAAATTGGTCCCACAGATGTTGAGGACAAACAAGAAGAGAAGAGACAAGATGAAGAGGAAGATGAATTGGATTTAGAGCTTCGACTTGGTCATGATCCATAG 546 0.4615 MESGQQHDSKTSSEESDNKADQVNDDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKIRQPTVPSVSNQPMEEYARPGFSMKISTDSPFSSPALETHRNYQTFYPASTSITRHGHGYHAEDLLHIQNPRPLSLFEEDRHTNLSLQIGPTDVEDKQEEKRQDEEEDELDLELRLGHDP* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g00786 181 Pfam C2H2-type zinc finger 33 57 - -
Eupl07g00786 181 PANTHER OS07G0101800 PROTEIN 1 180 - -
Eupl07g00786 181 Gene3D Classic Zinc Finger 12 82 - -
Eupl07g00786 181 MobiDBLite consensus disorder prediction 1 29 - -
Eupl07g00786 181 SUPERFAMILY beta-beta-alpha zinc fingers 31 59 IPR036236 -
Eupl07g00786 181 ProSitePatterns Zinc finger C2H2 type domain signature. 35 55 IPR013087 -
Eupl07g00786 181 Coils Coil 156 176 - -
Eupl07g00786 181 ProSiteProfiles Zinc finger C2H2 type domain profile. 33 60 IPR013087 -
Eupl07g00786 181 MobiDBLite consensus disorder prediction 142 181 - -
Eupl07g00786 181 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g00786 Eupl-Chr7 24271387 24271999 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g00786 23 67 C2H2 Transcription Factor Family AT3G09290 64.444 2.52e-16 70.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Eupl07g00786 zf-C2H2_6 1.6e-05 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g00786 - - nnu:104600823 180.644